Job Description P31434 Confidence 97.60% Date Thu Jan 5 11:47:24 GMT 2012 Rank 61 Aligned Residues 137 % Identity 11% Template d1h3ga3 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 2.1

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.									.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.																.	.	.																							.
Query SS confidence																														.	.	.	.	.	.	.	.																.	.	.																							.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	.	.	.	.	.	.	.	.	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	.	Y	I	G
Query Conservation																														.	.	.	.	.	.	.	.																.	.	.																							.
Alig confidence																	.	.												.	.	.	.	.	.	.	.																.	.	.																							.
Template Conservation																	.	.
Template Sequence		R	G	T	I	D	H	L	D	Y	I	A	G	L	G	F	.	.	T	Q	L	W	P	T	P	L	V	E	N	D	A	A	A	Y	S	Y	H	G	Y	A	A	T	D	H	Y	R	I	D	P	R	Y	G	S	N	E	D	F	V	R	L	S	T	E	A	R	K	R	G	X	G	L	I	Q	D	V	V	L	S	H	I	G
Template Known Secondary structure							T								T		.	.														S	S		G	G	G			S		S							T	T	T																T	T										S	B
Template Predicted Secondary structure																	.	.
Template SS confidence
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.			.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		352	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																					.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.		.	.	410
Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query SS confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Query Sequence		Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	.	M	G	V
Query Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation
Template Sequence		K	H	H	W	W	X	K	D	L	P	T	P	D	W	I	N	Y	G	G	K	F	V	P	T	Q	H	H	R	V	A	V	Q	D	P	Y	A	A	Q	A	D	S	E	N	F	T	K	G	W	F	V	E	G	X	P	D	L	N	Q	T	N	P	L	V	A	N	Y	L	I	Q	N	N	I	W	W	I	E	Y	A	G	L
Template Known Secondary structure		T	T	S	G	G	G	G	S		S	S	T	T	S	B	S			S	S			B					G	G	G	G	S		T	T												S	B	S	S	T	T	S		B	B		T	T	S																			T
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	F	K	T	D	F	G	E	R	I	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	G	L	R	I	D	T	Y	G	Y	S	D
Template Known Secondary structure		S					T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions