Job Description P31434 Confidence 97.79% Date Thu Jan 5 11:47:24 GMT 2012 Rank 48 Aligned Residues 139 % Identity 17% Template d1gcya2 SCOP info TIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain Resolution 1.60

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.												.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.			.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.																						.	.																							.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.																						.	.																							.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	.	.	.	.	.	.	.	.	.	.	.	D	C	F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	.	Y
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.																						.	.																							.
Alig confidence																	.	.						.	.	.	.	.	.	.	.	.	.	.																						.	.																							.
Template Conservation																	.	.
Template Sequence		N	I	L	R	Q	Q	A	A	T	I	A	A	D	G	F	.	.	S	A	I	W	M	P	V	P	W	R	D	F	S	S	W	S	K	S	G	G	G	E	G	Y	F	W	H	D	F	N	K	N	G	R	Y	G	S	D	A	Q	L	R	Q	A	A	S	A	L	G	G	A	G	V	K	V	L	Y	D	V	V	P	N	H
Template Known Secondary structure														T	T		.	.	S								S						B				B			S	S	T	T		S	S	S		S		S	S	S																T	T										S	B
Template Predicted Secondary structure																	.	.
Template SS confidence
		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.									.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420
Predicted Secondary structure																								.	.	.	.	.	.	.	.																																				.
Query SS confidence																								.	.	.	.	.	.	.	.																																				.
Query Sequence		I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	.	.	.	.	.	.	.	.	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	A	M	G	V	D	C	F	K	T	D	F	G	E	R
Query Conservation																								.	.	.	.	.	.	.	.																																				.
Alig confidence																								.	.	.	.	.	.	.	.																																				.
Template Conservation
Template Sequence		M	N	R	G	Y	P	D	K	E	I	N	L	P	A	G	Q	G	F	W	R	N	D	C	A	D	P	G	N	Y	P	N	D	C	D	D	G	D	R	F	I	G	G	D	A	D	L	N	T	G	H	P	Q	V	Y	G	M	F	R	D	E	F	T	N	L	R	S	Q	Y	G	A	G	G	F	R	F	D	F	V	R	G
Template Known Secondary structure				T	T		S	S		S					S	S	S	S		B	G	G	G	S				S	S	S		B	T	T	B	S	S			S	T	T	S	T	T	B	B		T	T	S																		S								S		G	G	G
Template Predicted Secondary structure
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.
		421	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	P	E
Template Known Secondary structure		S
Template Predicted Secondary structure
Template SS confidence
		198	.	200	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions