Return to main results Retrieve Phyre Job Id

Job DescriptionP31434
Confidence96.61%DateThu Jan 5 11:47:24 GMT 2012
Rank107Aligned Residues109
% Identity17%Templated1g94a2
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution1.74

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   309310.........320...... ...330.........340.... .....350.........360.........370.........380.....
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Query Sequence  WMKAFQWCDFEWDPLTFP. . DPEGMIRRLKAKGLKICV. WINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLA
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Template Sequence  WWTRYQPVSYELQSRGGNRAQFIDMVNRCSAAGVDIYVDTLINHMAAGSGTGTAGNSFGNKSFPIYSPQDFHESCTINNS
Template Known Secondary structure  GGGGGSBS
S
S
BTTB
TT

S
SS
BTTS
BTTB
SS

GGGB



B

TT
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   46...50.........60.........70.........80.........90.........100.........110.........120.....
 
   386 ...390.........400.........410.......
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Query Sequence  I. . . . . . . . . . . . . . . . . . YDFTNPDACKWYADKLKGLVAMGVDCFKTDF
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Template Sequence  DYGNDRYRVQNCELVGLADLDTASNYVQNTIAAYINDLQAIGVKGFRFDA
Template Known Secondary structure 
SBSTT
B
TTST

T
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   126...130.........140.........150.........160.........170.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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