Return to main results Retrieve Phyre Job Id

Job DescriptionP31434
Confidence96.98%DateThu Jan 5 11:47:24 GMT 2012
Rank98Aligned Residues98
% Identity15%Templated1bf2a3
SCOP infoTIM beta/alpha-barrel (Trans)glycosidases Amylase, catalytic domain
Resolution2.00

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   327..330.........340........ .350.........360....... ..370.........380.........390.....
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Query Sequence  DPEGMIRRLKAKGLKICVWINP. YIGQKSPVFKELQEKGYLL. . . . . . . . . . KRPDGSLWQWDKWQPGLAIYDFTNPDAC
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Template Sequence  EFQAMVQAFHNAGIKVYMDVVYNHTAEGGTWTSSDPTTATIYSWRGLDNATYYELTSGNQYFYDNTGIGANFNTYNTVAQ
Template Known Secondary structure  TT


SS
TT
SBSSSS
SS
B

SSB
B
TTSSSB

SSSSS

B
TTS
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   274.....280.........290.........300.........310.........320.........330.........340.........350...
 
   396...400........ .410.........420....
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Query Sequence  KWYADKLKGLVAM. GVDCFKTDFGERIPTD
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Template Sequence  NLIVDSLAYWANTMGVDGFRFDLASVLGNS
Template Known Secondary structure  TS


TTGGGGGB
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   354.....360.........370.........380...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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