Job Description P31434 Confidence 99.24% Date Thu Jan 5 11:47:24 GMT 2012 Rank 24 Aligned Residues 174 % Identity 16% Template c3lrmB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-galactosidase 1; PDBTitle: structure of alfa-galactosidase from saccharomyces cerevisiae with2 raffinose Resolution 2.70 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.				.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.
Predicted Secondary structure																				.	.																							.	.	.														.	.	.																	.
Query SS confidence																				.	.																							.	.	.														.	.	.																	.
Query Sequence		G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	.	.	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	.	.	.	P	L	H	V	F	H	F	D	C	F	W	M	K	.	.	.	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	D	.	P	E
Query Conservation																				.	.																							.	.	.														.	.	.																	.
Alig confidence										.	.	.	.	.						.	.																							.	.	.														.	.	.				.	.												.
Template Conservation										.	.	.	.	.																																																				.	.
Template Sequence		G	L	G	L	T	P	Q	M	.	.	.	.	.	G	W	D	N	W	N	T	F	A	C	D	V	S	E	Q	L	L	L	D	T	A	D	R	I	S	D	L	G	L	K	D	M	G	Y	K	Y	I	I	L	D	D	C	W	S	S	G	R	D	S	D	G	.	.	F	L	V	A	D	E	Q	K	F	P	N	G	M	G
Template Known Secondary structure		S			S	S				.	.	.	.	.				S					T	T																	T	T		G	G	G	T								S	S							T	T	S	.	.						T	T	T		T	T
Template Predicted Secondary structure										.	.	.	.	.																																																				.	.
Template SS confidence
		25	.	.	.	.	30	.	.						.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.			.	.	.	.	.	.	90	.	.	.	.	.	.	.
		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G
Query Conservation
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		H	V	A	D	H	L	H	N	N	S	F	L	F	G	M	Y	S	S	A	G	E	Y	T	C	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	P	G	S	L	G	R	E	E	E	D	A	Q	F	F	A	N	N	R
Template Known Secondary structure										T	T									S	S	S	B		T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B			T	T												T	T
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.																																				.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.			480	.
Predicted Secondary structure																																																																		.	.	.	.	.	.							.	.
Query SS confidence																																																																		.	.	.	.	.	.							.	.
Query Sequence		V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	.	.	.	.	.	.	K	F	P	V	H	W	.	.	G	G
Query Conservation																																																																		.	.	.	.	.	.							.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.																												.	.	.															.	.	.	.	.	.							.	.
Template Conservation											.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template Sequence		V	D	Y	L	K	Y	A	N	C	.	.	.	.	.	.	.	.	.	.	.	Y	N	K	G	Q	F	G	T	P	E	I	S	Y	H	R	Y	K	A	M	S	D	A	L	N	K	T	G	.	.	.	R	P	V	F	Y	S	L	C	N	W	G	Q	D	L	T	F	Y	W	G	S	G	I	A	N	S	W	R	M	S	G
Template Known Secondary structure										T	.	.	.	.	.	.	.	.	.	.	.	T		T	T			S	S																		T	T	.	.	.	S								S	T	T	T	T	T					S	T	T	T		S					S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.																												.	.	.
Template SS confidence
		143	.	.	.	.	.	.	150	.												.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.				.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		482	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	C	Y	A	N	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	T	A	E	F	T
Template Known Secondary structure			B		S		S	S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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