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Job DescriptionP31434
Confidence53.08%DateThu Jan 5 11:47:24 GMT 2012
Rank149Aligned Residues115
% Identity17%Templatec3eypB_
PDB info PDB header:structural genomics, unknown functionChain: B: PDB Molecule:putative alpha-l-fucosidase; PDBTitle: crystal structure of putative alpha-l-fucosidase from bacteroides2 thetaiotaomicron
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   274.....280.........290.........300.........310.........320......... 330.........340........
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Query Sequence  TTSFTTNYDEATVNSFIDGMAERNLPLHVFHFDCFWMKAFQWCDFEWDPLTFPDPE. . . . . GMIRRLKAKGLKICVWINP
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Template Sequence  AIFNPTALDCRQWMQTLKAAGIPAAILTAKHADGFCLWPSKYTDYSVKNAAWKNGKGDVVREFVDACEEYGLKAGIYLGP
Template Known Secondary structure  GG


SS

T


TT

BSS

TT
SSBGGGSSGGGGT

T

S
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   6970.........80.........90.........100.........110.........120.........130.........140........
 
   349350.........360.........370.........380.........390.........400........ .410........
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Query Sequence  YIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAM. . GVDCFKTDFG
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Template Sequence  HD. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RHEHLSPLYTTERYKEYYAHQLGELMSDYGKIWETWWDGA
Template Known Secondary structure  S
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T
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   149150 .........160.........170.........180.........190
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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