Job Description P31434 Confidence 99.74% Date Thu Jan 5 11:47:24 GMT 2012 Rank 17 Aligned Residues 232 % Identity 13% Template c3cc1B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:putative alpha-n-acetylgalactosaminidase; PDBTitle: crystal structure of a putative alpha-n-acetylgalactosaminidase2 (bh1870) from bacillus halodurans c-125 at 2.00 a resolution Resolution 2.00 Å

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		251	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300			.	.	.	.	.	.	.	.	.	310	.	.	.												.	.
Predicted Secondary structure																												.	.																									.	.														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.																									.	.														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	D	R	Y	T	R	F	T	G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	.	.	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	.	.	H	V	F	H	F	D	C	F	W	M	K	A	F	.	.	.	.	.	.	.	.	.	.	.	Q	W
Query Conservation																												.	.																									.	.														.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.			.	.	.	.	.							.	.																									.	.														.	.	.	.	.	.	.	.	.	.	.
Template Conservation										.	.	.	.	.			.	.	.	.	.
Template Sequence		V	N	R	L	S	A	L	T	.	.	.	.	.	P	P	.	.	.	.	.	X	G	W	N	S	W	D	C	Y	G	A	S	V	T	E	E	E	V	L	G	N	A	E	Y	X	A	N	H	L	K	K	Y	G	W	E	Y	I	V	V	D	I	Q	W	Y	E	P	T	A	N	N	P	F	A	P	L	C	X	D	E	Y
Template Known Secondary structure			S		B	T	T	B		.	.	.	.	.			.	.	.	.	.					S					T	T																		T	G	G	G	T								S		T	T		T	T				T	T					B		T	T
Template Predicted Secondary structure										.	.	.	.	.			.	.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.	10						.	.						.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		316	.	.	.	320	.	.	.	.	.	.	.							.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure														.	.	.	.	.	.
Query SS confidence														.	.	.	.	.	.
Query Sequence		C	D	F	E	W	D	P	L	T	F	P	D	.	.	.	.	.	.	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F
Query Conservation														.	.	.	.	.	.
Alig confidence														.	.	.	.	.	.
Template Conservation
Template Sequence		G	R	L	L	P	A	T	N	R	F	P	S	A	K	N	G	A	G	F	K	P	L	S	D	A	I	H	D	L	G	L	K	F	G	I	H	I	X	R	G	I	P	R	Q	A	V	Y	E	N	S	P	V	L	G	S	T	K	T	A	R	E	I	A	H	T	N	S	I	C	P	W	N	T	D	X	Y	G	V	D	P
Template Known Secondary structure		S		B				T	T	T		G	G	G	T	T	T	T	T	T										T	T									S	S									T		B		T	T	S	S		B							T	T			B	T	T	B		S						T
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S
Query Conservation
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Sequence		T	K	E	G	A	Q	S	Y	Y	N	S	L	F	E	L	Y	A	Q	W	G	V	D	F	V	K	V	D	D	I	A	A	S	R	L	Y	D	T	H	L	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	K	X	I	Q	R	A	I	Q	A	C	G	R	P	.	X	V	L	S	L	S	P	G	P	A
Template Known Secondary structure		T	S	T	T															T	T								S		S		B	T	T	B						.	.	.	.	.	.	.	.	.	.	.	.	.	.											T	S	S	S		.									S
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template SS confidence
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.		.	.	.	.	.	.	.	.	220	.
		470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	G	A	Q	K	F	P	V	H	W	G	G	D	C	Y	A	N	Y	E	S	M	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D
Query Conservation
Alig confidence								.	.	.	.
Template Conservation								.	.	.	.
Template Sequence		P	I	K	W	R	I	.	.	.	.	T	D	D	F	W	D	D	W	S	L	L	Y	Q	X	F	E	R	C	E	V	W	E	K	H	I	G	T	G	H	W	P	D
Template Known Secondary structure						T	T	.	.	.	.	S		S			S																	T	S	S			S	S
Template Predicted Secondary structure								.	.	.	.
Template SS confidence
		222	.	.	.	.	.					.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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