Job Description P31434 Confidence 97.01% Date Thu Jan 5 11:47:24 GMT 2012 Rank 95 Aligned Residues 114 % Identity 16% Template c3blpX_ PDB info PDB header:hydrolase Chain: X: PDB Molecule:alpha-amylase 1; PDBTitle: role of aromatic residues in human salivary alpha-amylase Resolution 1.60 Å

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		308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.
Predicted Secondary structure																					.	.	.																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																					.	.	.																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	.	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																					.	.	.																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.				.	.	.																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.
Template Sequence		P	W	W	E	R	Y	Q	P	V	S	Y	K	L	C	T	.	R	S	G	N	E	D	E	F	R	N	M	V	T	R	C	N	N	V	G	V	R	I	Y	V	D	A	V	I	N	H	M	C	G	N	A	V	S	A	G	T	S	S	T	C	G	S	Y	F	N	P	G	S	R	D	F	P	A	V	P	Y	S	G	W	D
Template Known Secondary structure			G	G	G	G	G	S	B	S		S		S		B	.	T	T	B															T	T										S					T	T	S		S	B	S		B	T	T				B	B	G	G	G	T	B	B	T	T	T	T	B		G	G	G
Template Predicted Secondary structure																	.
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.		.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
											364	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P
Query Conservation		.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	N	D	G	K	C	K	T	G	S	G	D	I	E	N	Y	N	D	A	T	Q	V	R	D	C	R	L	S	G	L	L	D	L	A	L	G	K	D	Y	V	R	S	K	I	A	E	Y	M	N	H	L	I	D	I	G	V	A	G	F	R	I	D	A	S	K	H	M	W
Template Known Secondary structure		B	S	T	T	T			S	S	S	S	B				T	T								S	B	B	T	T				B		T	T	S																		T							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions