Return to main results Retrieve Phyre Job Id

Job DescriptionP31434
Confidence99.29%DateThu Jan 5 11:47:24 GMT 2012
Rank23Aligned Residues176
% Identity21%Templatec3a5vA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   259260.........270...... ...280.........290......... 300.........310.... .....320....... ..330
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Query Sequence  GRPALPPAWSFGLWLTTS. . FTTNYDEATVNSFIDGMAERNLP. . . LHVFHFDCFWMKAFQ. . WCDFEWDPLTFPD. PEG
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Template Sequence  GLAITPQM. . . . . GWNTWNKYGCNVDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKP
Template Known Secondary structure  S

SS

.....SGGG

TT



SS
B
SS

TTS


B
TTT
TT
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   4.....10. ........20.........30.........40.........50.........60.........70........
 
   331........340.........350.........360.........370.........380.........390.........400.........410
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Query Sequence  MIRRLKAKGLKICVWINPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLVAMGV
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Template Sequence  LVDDIHNLGLKAGIYSSA. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTLTCGGHIASLGYEDIDAKTWAKWGI
Template Known Secondary structure  TT
S...................................SSB
TTS
B

TT
T
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   7980.........90...... ...100.........110.........120...
 
   411........420.........430.........440.........450.........460.........470... ...... 480..
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Query Sequence  DCFKTDFGERIPTDVQWFDGSDPQKMHNHYAYIYNELVWNVLKDTVGEEEAVLFARSASVGAQ. . . . . . KFPVHW. . GGD
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Template Sequence  DYLKYDNC. . . . . . YNQGQSGTPKLSYDRY. . . . . KAMGNALNKTG. . . RPMLYSLCNWGEDGPWNFASTISNSWRISGD
Template Known Secondary structure 

T......T
TT

SS.....T
...S


STTTT
STTT
S
SS
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   124.....130. ........140....... ..150........ .160.........170.........180.........
 
   483.....
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Query Sequence  CYANYE
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Template Conservation        
Template Sequence  VYDNFN
Template Known Secondary structure  B
S
SS
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   190.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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