Job Description P31434 Confidence 99.29% Date Thu Jan 5 11:47:24 GMT 2012 Rank 23 Aligned Residues 176 % Identity 21% Template c3a5vA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase i from mortierella vinacea Resolution 2.00 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330
Predicted Secondary structure																				.	.																								.	.	.																.	.														.
Query SS confidence																				.	.																								.	.	.																.	.														.
Query Sequence		G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	.	.	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	.	.	.	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	.	.	W	C	D	F	E	W	D	P	L	T	F	P	D	.	P	E	G
Query Conservation																				.	.																								.	.	.																.	.														.
Alig confidence										.	.	.	.	.						.	.																								.	.	.																.	.														.
Template Conservation										.	.	.	.	.
Template Sequence		G	L	A	I	T	P	Q	M	.	.	.	.	.	G	W	N	T	W	N	K	Y	G	C	N	V	D	E	Q	L	I	L	D	A	A	K	A	I	A	S	S	G	L	K	D	L	G	Y	N	Y	V	I	I	D	D	C	W	Q	K	N	E	R	E	S	S	K	T	L	L	A	D	P	T	K	F	P	R	G	I	K	P
Template Known Secondary structure		S			S	S				.	.	.	.	.				S					G	G	G																	T					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T
Template Predicted Secondary structure										.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.						.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
		331	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
Predicted Secondary structure
Query SS confidence
Query Sequence		M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V
Query Conservation
Alig confidence																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	V	D	D	I	H	N	L	G	L	K	A	G	I	Y	S	S	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	T	C	G	G	H	I	A	S	L	G	Y	E	D	I	D	A	K	T	W	A	K	W	G	I
Template Known Secondary structure									T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S		B			T	T													T
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																				.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.			480	.	.
Predicted Secondary structure																																																																	.	.	.	.	.	.							.	.
Query SS confidence																																																																	.	.	.	.	.	.							.	.
Query Sequence		D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	.	.	.	.	.	.	K	F	P	V	H	W	.	.	G	G	D
Query Conservation																																																																	.	.	.	.	.	.							.	.
Alig confidence										.	.	.	.	.	.																	.	.	.	.	.												.	.	.															.	.	.	.	.	.							.	.
Template Conservation										.	.	.	.	.	.																	.	.	.	.	.												.	.	.
Template Sequence		D	Y	L	K	Y	D	N	C	.	.	.	.	.	.	Y	N	Q	G	Q	S	G	T	P	K	L	S	Y	D	R	Y	.	.	.	.	.	K	A	M	G	N	A	L	N	K	T	G	.	.	.	R	P	M	L	Y	S	L	C	N	W	G	E	D	G	P	W	N	F	A	S	T	I	S	N	S	W	R	I	S	G	D
Template Known Secondary structure									T	.	.	.	.	.	.	T		T	T			S	S									.	.	.	.	.										T		.	.	.	S								S	T	T	T	T						S	T	T	T		S					S	S
Template Predicted Secondary structure										.	.	.	.	.	.																	.	.	.	.	.												.	.	.
Template SS confidence
		124	.	.	.	.	.	130	.							.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.						.	.	150	.	.	.	.	.	.	.	.				.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
		483	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	Y	A	N	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	D	N	F	N
Template Known Secondary structure		B		S		S	S
Template Predicted Secondary structure
Template SS confidence
		190	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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