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Job DescriptionP31434
Confidence99.97%DateThu Jan 5 11:47:24 GMT 2012
Rank12Aligned Residues531
% Identity15%Templatec2yfnA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:alpha-galactosidase-sucrose kinase agask; PDBTitle: galactosidase domain of alpha-galactosidase-sucrose kinase,2 agask
Resolution1.45 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   63......70.........80.........90.........100.........110.........120.........130.........140..
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Query Sequence  GIVGVRIEHFQGALNNGPHYPLNILQDVKVTIENTERYAEFKSGNLSARVSKGEFWSLDFLRNGERITGSQVKNNGYVQD
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Template Sequence  QTLEIVLADENAQVEVHLLYGVLEENDVITRSV. . . . . RIKNTGTGQITIEKAAAACLDFVQGEFDVLRFYGKHAME. . .
Template Known Secondary structure  TTTTTTTT.....
SSS
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   131........140.........150.........160... ......170.........180.........190.........200..
 
   143......150.........160.........170....... ..180.........190.........200.........210.........220.
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Query Sequence  TNNQRNYMFERLDLGVGETVYGLGERFTALVRNGQ. TVETWNRDGGTSTEQAYKNIPFYMTNRGYGVLVNHPQCVSFEVG
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Template Sequence  . . . . . . RNLERTPLGHGT. . IAFGSRRGTSSHQYNPAVILAEKGTTETAGSCYGMLFVYSGNFSCEAEKDQFNQTRLLLG
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B..
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   203......210.... .....220.........230.........240.........250.........260.........270....
 
   222.......230........ .240.........250.........260.........270. ........280.........290
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Query Sequence  SEKVSKVQFSVESEYLE. . . . YFVIDGPTPKAVLDRYTRFTGRPALPPAWSFGL. . . . . . . WLTTSFTTNYDEATVNSFI
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Template Sequence  LNEELFSYPLASGETFTVPEVILSYSAEGLSALSQQYHNCIRNHVCRSKYVHMQRPVLINSWEAAYF. . DFTGDTIVDLA
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STT


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   275....280.........290.........300.........310.........320.........330.........340. ........350..
 
   291........300.........310.... .....320....... ..330.........340........ .350.........360...
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Query Sequence  DGMAERNLPLHVFHFDCFWMKAFQ. . . . . WCDFEWDPLTFPD. PEGMIRRLKAKGLKICVWINP. YIGQKSPVFKELQEK
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Template Sequence  KEAASLG. . IDMVVMDDGWFGKRNDDNSSLGDWQVNETKLGGSLAELITRVHEQGMKFGIWIEPEMINEDSDLYRA. . HP
Template Known Secondary structure  TTT..


SSSBTT
SSTTS
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SB
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TT

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G
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   353...... 360.........370.........380.........390.........400.........410.........420...... ..
 
   364.....370.........380.........390.........400...... ...410.........420.........430.........440..
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Query Sequence  GYLLKRPDGSLWQWDKWQPGLAIYDFTNPDACKWYADKLKGLV. AMGVDCFKTDFGERIPTDVQWFDGSDPQKMHNHYAY
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Template Sequence  DWAIRIQGKKPVRS. . . . RNQLLLDFSRKEVRDCVFDQICVVLDQGKIDYVKWDMNR. . SMADVYAGNLSYDYVLGVY. .
Template Known Secondary structure  GGB


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B....TTBB
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   429430.........440.. .......450.........460.........470.........480. ........490.........500
 
   443......450.........460.........470.. .......480.........490.........500.........510......
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Query Sequence  IYNELVWNVLKDTVGEEEAVLFARSASVGA. . . . . . QKFPVHWGGDCYANYESMAESLRGGLSIGLSGFGFWSHDIGGFE
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Template Sequence  . . . . DFMERLCSRYPD. . LLLEGCSGGGGRFDAGMLYYSPQIWCSDNTDAINRTRIQYGTSFFYPVSAMGAHVSAVPNHQ
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TT..

BTBBTT
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   501........510.. .......520.........530.........540.........550.........560.........570....
 
   517..520.........530.........540.........550.........560.........570.........580.........590......
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Query Sequence  NTAPAHVYKRWCAFGLLSSHSRLHGSKSYRVPWAYDDESCDVVRFFTQLKCRMMPYLYREAARANARGTPMMRAMMMEFP
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Template Sequence  TGRVTSFHTRG. . VTAMAGTFGY. . . . . ELNPALLSDEEKQQIREQIKTYKKYETLINE. . . . . . . . . . GTYWRLSDPFT
Template Known Secondary structure  T




..TTTT

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   575....580..... ....590..... ....600.........610.........620...... ...630.......
 
   597..600.... .....610.........620....... ..630 .........640......
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Query Sequence  DDPACDYL. . . . DRQYMLGDNVMVAPVFTEAGDVQ. FYL. PEGRWTHLWHNDELDG
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Template Sequence  DEIAAWMSVSEEQDHALVSVVRLMAEANQATVYVRLRGLKPDAVYLEEQSGRQYSG
Template Known Secondary structure  SS
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   638.640.........650.........660.........670.........680.........690...
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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