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Job DescriptionP31434
Confidence96.73%DateThu Jan 5 11:47:24 GMT 2012
Rank105Aligned Residues89
% Identity18%Templatec2x4bA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:limit dextrinase; PDBTitle: barley limit dextrinase in complex with beta-cyclodextrin
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   326. ..330.........340........ .350....... ..360.........370.........380.........390...
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Query Sequence  PD. . . . . . . PEGMIRRLKAKGLKICVWINP. YIGQKSPVF. . . . KELQEKGYLLKRPDGSLWQWDKWQPGLAIYDFTNPD
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Template Sequence  PDGPSRIIEYRQMVQALNRIGLRVVMDVVYNHLDSSGPCGISSVLDKIVPGYYVRRDTNGQI. . . ENSAAMNNTASEHFM
Template Known Secondary structure  SSSTTT


SB
S

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STTTSB
B
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TTSSSBB
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   373......380.........390.........400.........410.........420.........430.... .....440.........
 
   394.....400........ .410.......
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Query Sequence  ACKWYADKLKGLVAM. GVDCFKTDF
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Template Sequence  VDRLIVDDLLNWAVNYKVDGFRFDL
Template Known Secondary structure  S


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   450.........460.........470....
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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