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Job DescriptionP31434
Confidence97.16%DateThu Jan 5 11:47:24 GMT 2012
Rank85Aligned Residues99
% Identity16%Templatec2taaA_
PDB info PDB header:hydrolase (o-glycosyl)Chain: A: PDB Molecule:taka-amylase a; PDBTitle: structure and possible catalytic residues of taka-amylase a
Resolution3.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   326...330.........340...... ...350.........360.........370.........380...... ..
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Query Sequence  PDPEGMIRRLKAKGLKICVWI. . . . . . . . NPYIGQKSPVFKELQEKGYLLKRPDGSLWQWDKWQPGLAI. . . . . . . . . YD
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Template Sequence  DDLKALSSALHERGMYLMVDVVANHMGYDGAGSSVDYSVFKPFSSQDYFHPFCFIQNYEDQTQVEDCWLGDNTVSLPDLD
Template Known Secondary structure  TS

TTB

S
GGG


SS
TT
SSSTTB



B

SGGG
SSTTTSBTT
BB
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   98.100.........110.........120.........130.........140.........150.........160.........170.......
 
   389390.........400...... ...410.........420....
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Query Sequence  FTNPDACKWYADKLKGLV. AMGVDCFKTDFGERIPTD
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Template Sequence  TTKDVVKNEWYDWVGSLVSNYSIDGLRIDTVKHVQKD
Template Known Secondary structure 
SSSTTT

STT
STT
TT
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   178.180.........190.........200.........210....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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