Job Description P31434 Confidence 97.27% Date Thu Jan 5 11:47:24 GMT 2012 Rank 78 Aligned Residues 153 % Identity 12% Template c2qpuB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:alpha-amylase type a isozyme; PDBTitle: sugar tongs mutant s378p in complex with acarbose Resolution 1.70 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.					.	.	.	.	.	.	.		.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
Predicted Secondary structure																																												.	.	.	.								.									.	.	.
Query SS confidence																																												.	.	.	.								.									.	.	.
Query Sequence		G	L	W	L	T	T	S	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	.	.	.	.	A	F	Q	W	C	D	F	.	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K
Query Conservation																																												.	.	.	.								.									.	.	.
Alig confidence																															.	.												.	.	.	.								.									.	.	.
Template Conservation																															.	.
Template Sequence		G	F	N	W	E	S	W	K	Q	S	G	G	W	Y	N	M	M	M	G	K	V	D	D	I	A	A	A	G	V	.	.	T	H	V	W	L	P	P	P	S	H	S	V	S	N	E	G	Y	M	P	G	R	L	Y	D	I	D	A	S	K	Y	G	N	A	A	E	L	K	S	L	I	G	A	L	H	G	K	G	V	Q
Template Known Secondary structure					T	T	G	G	G		T	T							G	G	G							T	T		.	.									S		B	S	S	T	T	S		S	B			T	T		G	G	G		S	S																T	T
Template Predicted Secondary structure																															.	.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.
		342	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.																				.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	C	V	W	I	N	P	.	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K
Query Conservation									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	I	A	D	I	V	I	N	H	R	C	A	D	Y	K	D	S	R	G	I	Y	C	I	F	E	G	G	T	S	D	G	R	L	D	W	G	P	H	M	I	C	R	D	D	T	K	Y	S	D	G	T	A	N	L	D	T	G	A	D	F	A	A	A	P	D	I	D	H	L	N	D	R	V	Q	R	E	L	K	E	W
Template Known Secondary structure									S	B				S				T	T	S								S	S	S	S		T	T				G	G	G	B		T	T		T	T	T			S		S				S	S				T	T	S		B	B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
		402	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		L	K	G	L	V	.	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	L	W	L	K	S	D	L	G	F	D	A	W	R	L	D	F	A	R	G	Y	S	P	E
Template Known Secondary structure								T	T								T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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