Job Description P31434 Confidence 94.78% Date Thu Jan 5 11:47:24 GMT 2012 Rank 125 Aligned Residues 126 % Identity 11% Template c2d0gA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase i; PDBTitle: crystal structure of thermoactinomyces vulgaris r-47 alpha-2 amylase 1 (tvai) mutant d356n/e396q complexed with p5, a3 pullulan model oligosaccharide Resolution 2.60 Å

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		327	.	.	330	.	.	.	.	.	.	.	.	.					340	.	.	.	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.	.																.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	P	E	G	M	I	R	R	L	K	A	K	G	.	.	.	.	L	K	I	C	V	W	I	N	P	.	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I
Query Conservation															.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		T	L	Q	T	L	I	N	D	I	H	S	T	A	N	G	P	K	G	Y	L	I	L	D	G	V	F	N	H	T	G	D	S	H	P	W	F	D	K	Y	N	N	F	S	S	Q	G	A	Y	E	S	Q	S	S	P	W	Y	N	Y	Y	T	F	Y	T	W	P	D	S	.	.	.	Y	A	S	F	L	G	F	N	S	L
Template Known Secondary structure													S	S	S	S	S											S	B			T	T	S	T	T	T		T	T			S	S	S			T	T	T		T	T		T	T	G	G	G	B					T	T	T		.	.	.					T	T
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.				.	.	.	310	.	.	.	.	.	.
		387	.	.	390	.					.	.	.	.	.	.	.	.	400	.	.	.	.	.	.							.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.																.	.	.	.	.	.
Query SS confidence							.	.	.	.																.	.	.	.	.	.
Query Sequence		Y	D	F	T	N	.	.	.	.	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	.	.	.	.	.	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V
Query Conservation							.	.	.	.																.	.	.	.	.	.
Alig confidence							.	.	.	.																.	.	.	.	.	.																								.	.	.	.	.	.	.	.
Template Conservation																																																							.	.	.	.	.	.	.	.
Template Sequence		P	K	L	N	Y	G	N	S	G	S	A	V	R	G	V	I	Y	N	N	S	N	S	V	A	K	T	Y	L	N	P	P	Y	S	V	D	G	W	R	L	N	A	A	Q	Y	V	D	A	N	G	N	N	G	S	.	.	.	.	.	.	.	.	D	V	T	N	H	Q	I	W	S	E	F	R	N	A	V	K	G	V	N
Template Known Secondary structure			B	B				S	T	T								T	T	S	T	T	S							S	T	T	T								T	T	G	G	G			S	T	T				S	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																																							.	.	.	.	.	.	.	.
Template SS confidence
		317	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.									370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
		457	.	.	460	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	E	E	E	A	V	L	F	A
Query Conservation
Alig confidence				.	.
Template Conservation				.	.
Template Sequence		S	N	.	.	A	A	I	I	G
Template Known Secondary structure		T	T	.	.
Template Predicted Secondary structure				.	.
Template SS confidence
		389	390			.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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