Job Description P31434 Confidence 100.00% Date Thu Jan 5 11:47:24 GMT 2012 Rank 11 Aligned Residues 431 % Identity 18% Template c1zy9A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of alpha-galactosidase (ec 3.2.1.22) (melibiase)2 (tm1192) from thermotoga maritima at 2.34 a resolution Resolution 2.34 Å

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		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	R	Y	A	E	F	K	S	G	N	L	S	A	R	V	S	K	G	E	F	W	S	L	D	F	L	R	N	G	E	R	I	T	G	S	Q	V	K	N	N	G	Y	V	Q	D	T	N	N	Q	R	N	Y	M	F	E	R	L	D	L	G	V	G	E	T	V	Y	G	L	G	E	R	F	T	A	L	V	R	N	G
Query Conservation
Alig confidence																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Conservation																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		R	E	G	R	F	V	L	K	E	K	N	F	T	V	E	F	A	V	E	.	K	I	H	L	G	W	K	I	S	G	R	V	K	G	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	G	R	L	E	V	L	R	T	K	A	P	E	K	V	L	V	N	N	W	Q	.	S	W	G	P	C	R	V
Template Known Secondary structure			S								S	S									.			T	T												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													S							S	B	.	T	T	S
Template Predicted Secondary structure																					.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.		.	.	.	.	.	.	70
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.											.	200	.	.	.	.	.			.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.						.	.	.	.	.	.	.	.	.	.								.	.																																		.	.	.	.	.
Query SS confidence																			.						.	.	.	.	.	.	.	.	.	.								.	.																																		.	.	.	.	.
Query Sequence		Q	T	V	E	T	W	N	R	D	G	G	T	S	T	E	Q	A	.	Y	K	N	I	P	.	.	.	.	.	.	.	.	.	.	F	Y	M	T	N	R	G	.	.	Y	G	V	L	V	N	H	P	Q	C	V	S	F	E	V	G	S	E	K	V	S	K	V	Q	F	S	V	E	S	E	Y	L	E	.	.	.	.	.
Query Conservation																			.						.	.	.	.	.	.	.	.	.	.								.	.																																		.	.	.	.	.
Alig confidence																			.						.	.	.	.	.	.	.	.	.	.								.	.																.																		.	.	.	.	.
Template Conservation																																																											.
Template Sequence		V	D	A	F	S	F	K	P	P	E	I	D	P	N	W	R	Y	T	A	S	V	V	P	D	V	L	E	R	N	L	Q	S	D	Y	F	V	A	E	E	G	K	V	Y	G	F	L	S	S	K	I	A	H	P	F	F	A	V	.	E	D	G	E	L	V	A	Y	L	E	Y	F	D	V	E	F	D	D	F	V	P	L
Template Known Secondary structure				G	G	G								G	G	G						S	S					T	T	S					S					T	T						S			S	S	S							.		T	T									T	T
Template Predicted Secondary structure																																																											.
Template SS confidence
		71	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.		.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
				239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.			260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.		.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure		.	.																						.	.																	.
Query SS confidence		.	.																						.	.																	.
Query Sequence		.	.	Y	F	V	I	D	G	P	T	P	K	A	V	L	D	R	Y	T	R	F	T	G	.	.	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	.	S	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	A	F
Query Conservation		.	.																						.	.																	.
Alig confidence		.	.																						.	.																	.																					.	.
Template Conservation																																																																.	.
Template Sequence		E	P	L	V	V	L	E	D	P	N	T	P	L	L	L	E	K	Y	A	E	L	V	G	X	E	N	N	A	R	V	P	K	H	T	P	T	G	W	C	S	W	Y	H	Y	F	L	D	L	T	W	E	E	T	L	K	N	L	K	L	A	K	N	.	.	F	P	F	E	V	F	Q	I	D	D	A	Y	E	K	D	I
Template Known Secondary structure										S																	T	T					S	S							S					G	G	G													G	G	G	.	.	T	T		S						T	T	S				T
Template Predicted Secondary structure																																																																.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.			.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		314	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		Q	W	C	D	F	E	W	D	P	L	T	F	P	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	.	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P
Query Conservation																																						.
Alig confidence			.	.																																		.													.	.
Template Conservation			.	.																																															.	.
Template Sequence		G	.	.	D	W	L	V	T	R	G	D	F	P	S	V	E	E	X	A	K	V	I	A	E	N	G	F	I	P	G	I	W	T	A	P	F	S	V	S	E	T	S	D	V	F	N	E	H	P	.	.	D	W	V	V	K	E	N	G	E	P	K	X	A	Y	R	N	W	N	K	K	I	Y	A	L	D	L	S	K	D
Template Known Secondary structure		T	.	.							T	T														T	T									T	T				T	T								G	.	.	G	G	B				T	T									T	T						B		T	T
Template Predicted Secondary structure			.	.																																															.	.
Template SS confidence
		228			.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.			.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		393	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A
Query Conservation
Alig confidence																										.	.	.	.	.	.	.	.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		E	V	L	N	W	L	F	D	L	F	S	S	L	R	K	X	G	Y	R	Y	F	K	I	D	.	.	.	.	.	.	.	.	F	L	F	A	G	A	V	P	G	E	R	K	K	N	I	T	P	I	Q	A	F	R	K	G	I	E	T	I	R	K	A	V	G	E	D	S	F	I	L	G	C	G	S	P	L	L	P	A
Template Known Secondary structure																	T	T								.	.	.	.	.	.	.	.		G	G	G	G	G		S	S	B		S	S	S																				T	T	S						S		B	S	G	G	G
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		304	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.									.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.
		473	.	.	.	.	.	.			480	.	.	.	.	.	.	.	.	.										490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.						.	.		.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.		.
Predicted Secondary structure									.	.											.	.	.	.	.	.	.	.	.																							.	.	.	.	.			.																					.
Query SS confidence									.	.											.	.	.	.	.	.	.	.	.																							.	.	.	.	.			.																					.
Query Sequence		Q	K	F	P	V	H	W	.	.	G	G	D	C	Y	A	N	Y	E	S	.	.	.	.	.	.	.	.	.	M	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D	.	.	.	.	.	I	G	.	G	F	E	N	T	A	P	A	H	V	Y	K	R	W	C	A	F	G	L	L	.	S
Query Conservation									.	.											.	.	.	.	.	.	.	.	.																							.	.	.	.	.			.																					.
Alig confidence									.	.											.	.	.	.	.	.	.	.	.																							.	.	.	.	.			.																					.
Template Conservation
Template Sequence		V	G	C	V	D	G	X	R	I	G	P	D	T	A	P	F	W	G	E	H	I	E	D	N	G	A	P	A	A	R	W	A	L	R	N	A	I	T	R	Y	F	X	H	D	R	F	W	L	N	D	P	D	C	L	I	L	R	E	E	K	T	D	L	T	Q	K	E	K	E	L	Y	S	Y	T	C	G	V	L	D	N
Template Known Secondary structure		T	T	T		S					S	S				S	S			T	T	S		S	S	S	S	S												T	G	G	G	B	T	T	T	B							B				S	S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		376	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.
		535	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	H	S	R	L	H	G	S	K	S	Y	R	V	P	W	A	Y	D	D	E	S	C	D	V	V	R	F	F	T	Q	L	K
Query Conservation
Alig confidence							.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		X	I	I	E	S	.	.	.	.	.	.	D	D	L	S	L	V	R	D	H	G	K	K	V	L	K	E	T	L	E	L	L
Template Known Secondary structure							.	.	.	.	.	.	S		G	G	G														T	T
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		456	.	.	.	460							.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.