Job Description P31434 Confidence 99.54% Date Thu Jan 5 11:47:24 GMT 2012 Rank 20 Aligned Residues 201 % Identity 18% Template c1uasA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-galactosidase; PDBTitle: crystal structure of rice alpha-galactosidase Resolution 1.50 Å

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		259	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.				300	.	.	.	.	.	.	.	.	.	310	.	.	.	.			.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.
Predicted Secondary structure																																											.	.	.																.	.														.
Query SS confidence																																											.	.	.																.	.														.
Query Sequence		G	R	P	A	L	P	P	A	W	S	F	G	L	W	L	T	T	S	F	T	T	N	Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	.	.	.	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	.	.	W	C	D	F	E	W	D	P	L	T	F	P	D	.	P	E	G	M	I
Query Conservation																																											.	.	.																.	.														.
Alig confidence									.	.	.																																.	.	.																.	.														.
Template Conservation									.	.	.
Template Sequence		G	L	G	R	T	P	Q	.	.	.	M	G	W	N	S	W	N	H	F	Y	C	G	I	N	E	Q	I	I	R	E	T	A	D	A	L	V	N	T	G	L	A	K	L	G	Y	Q	Y	V	N	I	D	D	C	W	A	E	Y	S	R	D	S	Q	G	N	F	V	P	N	R	Q	T	F	P	S	G	I	K	A	L	A
Template Known Secondary structure		S			S	S			.	.	.					S					T	T																	T	S					T								S	S		B		S	S			T	T	S				B		T	T	T		T	T
Template Predicted Secondary structure									.	.	.
Template SS confidence
		4	.	.	.	.	.	10				.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		333	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	L	K	A	K	G	L	K	I	C	V	W	I	N	P	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A	M	G	V	D	C
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Y	V	H	A	K	G	L	K	L	G	I	Y	S	D	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	S	Q	T	C	S	N	K	M	P	G	S	L	D	H	E	E	Q	D	V	K	T	F	A	S	W	G	V	D	Y
Template Known Secondary structure							T	T									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	S	B		T	T	S	S	S	B			T	T													T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.																																			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
		413	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.							.	.	.	.	.	.			480	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.							.	.
Query SS confidence																																																															.	.	.	.	.	.							.	.
Query Sequence		F	K	T	D	F	G	E	R	I	P	T	D	V	Q	W	F	D	G	S	D	P	Q	K	M	H	N	H	Y	A	Y	I	Y	N	E	L	V	W	N	V	L	K	D	T	V	G	E	E	E	A	V	L	F	A	R	S	A	S	V	G	A	Q	.	.	.	.	.	.	K	F	P	V	H	W	.	.	G	G	D	C	Y
Query Conservation																																																															.	.	.	.	.	.							.	.
Alig confidence								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.															.	.	.	.	.	.							.	.
Template Conservation								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template Sequence		L	K	Y	D	N	C	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	D	A	G	R	S	V	M	E	R	Y	T	R	M	S	N	A	M	K	T	Y	G	.	.	.	K	N	I	F	F	S	L	C	E	W	G	K	E	N	P	A	T	W	A	G	R	M	G	N	S	W	R	T	T	G	D	I	A
Template Known Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			T	T																			.	.	.	T	T	S						S	T	T	T	T		G	G	G	T	G	G	G	T		S					S	S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																							.	.	.
Template SS confidence
		127	.	.	130	.	.																	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.				.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.
		485	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	Y	E	S	M	A	E	S	L	R	G	G	L	S	I	G	L	S	G	F	G	F	W	S	H	D	I	G	G	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	N	W	G	S	M	T	S	R	A	D	E	N	D	Q	W	A	A	Y	A	G	P	G	G	W	N	D	P	D	M	L
Template Known Secondary structure		S	S													T	T	G	G	G		B	T	T	B
Template Predicted Secondary structure
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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