Job Description P31434 Confidence 97.62% Date Thu Jan 5 11:47:24 GMT 2012 Rank 60 Aligned Residues 140 % Identity 16% Template c1tcmB_ PDB info PDB header:glycosyltransferase Chain: B: PDB Molecule:cyclodextrin glycosyltransferase; PDBTitle: cyclodextrin glycosyltransferase w616a mutant from bacillus2 circulans strain 251 Resolution 2.20 Å

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		285	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.																	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.
Predicted Secondary structure												.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query SS confidence												.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Query Sequence		T	V	N	S	F	I	D	G	M	A	.	.	.	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I
Query Conservation												.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Alig confidence												.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.	.	.
Template Conservation
Template Sequence		D	W	Q	G	I	I	N	K	I	N	D	G	Y	L	T	G	M	G	V	T	A	I	W	I	S	Q	P	V	E	N	I	Y	S	I	I	N	Y	S	G	V	N	N	T	A	Y	H	G	Y	W	A	R	D	F	K	K	T	N	P	A	Y	G	T	I	A	D	F	Q	N	L	I	A	A	A	H	A	K	N	I	K	V
Template Known Secondary structure												S	S	T	T	G	G	G	T																				T	T						T	T			S									T	T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		53	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
		343	.	.	.	.	.		.	350	.	.	.	.	.	.	.	.	.	360	.	.							.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.																	.	.	.	390	.	.	.	.	.	.	.	.	.
Predicted Secondary structure								.															.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.															.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		C	V	W	I	N	P	.	Y	I	G	Q	K	S	P	V	F	K	E	L	Q	E	.	.	.	.	.	.	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	D	F	T	N	P	D	A	C	K	W	Y	A
Query Conservation								.															.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.															.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	I	D	F	A	P	N	H	T	S	P	A	S	S	D	Q	P	S	F	A	E	N	G	R	L	Y	D	N	G	T	L	L	G	G	Y	T	N	D	T	Q	N	L	F	H	H	N	G	G	T	D	F	S	T	T	E	N	G	I	Y	K	N	L	Y	D	L	A	D	L	N	H	N	N	S	T	V	D	V	Y	L	K
Template Known Secondary structure								S				B			S	S		T	T	S	T	T	T	T					T	T						S	T	T			S			B			S		B				S	S						S	S	B	B	T	T	B			B		T	T	S
Template Predicted Secondary structure
Template SS confidence
		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
		400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	K	L	K	G	L	V	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	A	I	K	M	W	L	D	L	G	I	D	G	I	R	M	D	A	V	K	H	M	P	F	G
Template Known Secondary structure										T	T							T	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions