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Job DescriptionP31434
Confidence97.81%DateThu Jan 5 11:47:24 GMT 2012
Rank44Aligned Residues138
% Identity17%Templatec1jdaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:1,4-alpha maltotetrahydrolase; PDBTitle: maltotetraose-forming exo-amylase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   284.....290.........300.........310. ........320...... ...330.........340......
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Query Sequence  ATVNSFIDGMAERNLPLHVFHFDCFWMK. . . . . . . . . . . . . . AFQWCDFEWDPLTFP. . . DPEGMIRRLKAKGLKICVWI
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Template Sequence  NILRQQAATIAADGF. . SAIWMPVPWRDFSSWSDGSKSGGGEGYFWHDFNKNGR. YGSDAQLRQAASALGGAGVKVLYDV
Template Known Secondary structure  TT
..S


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B
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B

SSTT


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SS.S

TT
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   37..40.........50. ........60.........70.........80........ .90.........100.........110...
 
   347. .350.........360.........370..... ....380.........390.........400...... ...410......
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Query Sequence  NP. YIGQKSPVFKELQEKGYLLKRPDGSLW. . . . . . . . QWDKWQPGLAIYDFTNPDACKWYADKLKGLV. AMGVDCFKTD
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Template Sequence  VPNHMNRGYPDKEINLPAGQGFWRNDCADPGNYPNDCDDGDRFIGGDADLNTGHPQVYGMFRDEFTNLRSQYGAGGFRFD
Template Known Secondary structure 
TTB

TT
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SSSS
BGGGS


SSS
BTTBSS

STTSSSBB
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   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   417..420....
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Query Sequence  FGERIPTD
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Template Sequence  FVRGYAPE
Template Known Secondary structure 
GGGS
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   194.....200.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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