Job Description P31434 Confidence 33.08% Date Thu Jan 5 11:47:24 GMT 2012 Rank 165 Aligned Residues 115 % Identity 15% Template c1j0yD_ PDB info PDB header:hydrolase Chain: D: PDB Molecule:beta-amylase; PDBTitle: beta-amylase from bacillus cereus var. mycoides in complex2 with glucose Resolution 2.10 Å

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		281	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.												.	.	.
Predicted Secondary structure																																																																				.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																				.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Y	D	E	A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	D	C	F	W	M	K	A	F	Q	W	C	D	F	E	W	D	P	L	T	F	P	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V	W	I	.	.	.	.	.	.	.	.	.	.	.	N	P	Y
Query Conservation																																																																				.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.																						.	.	.																							.	.	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.																						.	.	.
Template Sequence		T	N	W	E	T	F	E	N	D	L	R	W	A	K	Q	N	G	F	.	.	Y	A	I	T	V	D	F	W	W	G	D	M	E	K	N	G	D	Q	Q	F	D	.	.	.	F	S	Y	A	Q	R	F	A	Q	S	V	K	N	A	G	M	K	M	I	P	I	I	S	T	H	Q	C	G	G	N	V	G	D	D	C	N
Template Known Secondary structure		S															T	T		.	.													T		S	S	T	T				.	.	.														T	T										S		B	S	S	S	T	T
Template Predicted Secondary structure																				.	.																						.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.			.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100
		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	G	Q	K	S	P	V	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P	D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	A
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.
Template Sequence		V	P	I	P	S	W	V	W	N	Q	K	S	D	D	S	L	Y	F	K	S	E	T	G	T	V	N	K	E	T	L	N	P	L	A	S	.	.	.	.	.	.	.	D	V	I	R	K	E	Y	G	E	L	Y	T	A	F	A	A
Template Known Secondary structure		B				G	G	G	G	G	G		S	S	S		S	S				T	T						S	S			T	T			.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.								.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions