Job Description P31434 Confidence 97.08% Date Thu Jan 5 11:47:24 GMT 2012 Rank 92 Aligned Residues 138 % Identity 13% Template c1e40A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:alpha-amylase; PDBTitle: tris/maltotriose complex of chimaeric amylase from b.2 amyloliquefaciens and b. licheniformis at 2.2a Resolution 2.2 Å

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		284	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.							.	.	.	.	310	.	.	.	.	.	.	.	.											.	320	.	.	.	.	.	.				.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.									.	.	.
Query SS confidence																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.									.	.	.
Query Sequence		A	T	V	N	S	F	I	D	G	M	A	E	R	N	L	P	L	H	V	F	H	F	.	.	.	.	.	.	D	C	F	W	M	K	A	F	Q	W	C	D	F	.	.	.	.	.	.	.	.	.	.	E	W	D	P	L	T	F	P	.	.	.	D	P	E	G	M	I	R	R	L	K	A	K	G	L	K	I	C	V
Query Conservation																								.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.									.	.	.
Alig confidence																	.	.						.	.	.	.	.	.														.	.	.	.	.	.	.	.	.	.					.				.	.	.
Template Conservation																	.	.																																							.
Template Sequence		K	R	L	Q	N	D	A	E	H	L	S	D	I	G	I	.	.	T	A	V	W	I	P	P	A	Y	K	G	L	S	Q	S	D	N	G	Y	G	P	Y	D	L	Y	D	L	G	E	F	Q	Q	K	G	T	V	R	T	.	K	Y	G	T	K	S	E	L	Q	D	A	I	G	S	L	H	S	R	N	V	Q	V	Y	G
Template Known Secondary structure															T		.	.									S			S	S	T	T			S	S	S				T	T		S	S		S		B	T	T	B	S	S		.	S	S															T	T	T
Template Predicted Secondary structure																	.	.																																							.
Template SS confidence
		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.			.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.		.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
		345	.	.	.		.	350	.	.	.	.	.	.																																																						.	.	.	360	.	.	.	.	.	.	.	.	.	370
Predicted Secondary structure						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	I	N	P	.	Y	I	G	Q	K	S	P	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	K	E	L	Q	E	K	G	Y	L	L	K	R	P
Query Conservation						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	V	L	N	H	K	A	G	A	D	A	T	E	D	V	T	A	V	E	V	N	P	A	N	R	N	Q	E	T	S	E	E	Y	Q	I	K	A	W	T	D	F	R	F	P	G	R	G	N	T	Y	S	D	F	K	W	H	W	Y	H	F	D	G	A	D	W	D	E	S	R	K	I	S	R	I	F	K	F	R	G
Template Known Secondary structure						S						S												T	T							S											B			T	T	T	T	T	S	S					B		G	G	G					S		B	T	T	T	T	B								S
Template Predicted Secondary structure
Template SS confidence
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.								.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.		.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.																					.
Query SS confidence																		.	.	.	.	.	.	.																					.
Query Sequence		D	G	S	L	W	Q	W	D	K	W	Q	P	G	L	A	I	.	.	.	.	.	.	.	Y	D	F	T	N	P	D	A	C	K	W	Y	A	D	K	L	K	G	L	V	.	A	M	G	V	D	C	F	K	T	D	F	G	E	R	I	P	T	D
Query Conservation																		.	.	.	.	.	.	.																					.
Alig confidence																		.	.	.	.	.	.	.																					.
Template Conservation
Template Sequence		E	G	K	A	W	D	W	E	V	S	S	E	N	G	N	Y	D	Y	L	M	Y	A	D	V	D	Y	D	H	P	D	V	V	A	E	T	K	K	W	G	I	W	Y	A	N	E	L	S	L	D	G	F	R	I	D	A	A	K	H	I	K	F	S
Template Known Secondary structure		T	T					S	S	S			T	T	S						S	S					T	T																			T	T							T	T	G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions