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Job DescriptionP37306
Confidence100.00%DateThu Jan 5 11:55:07 GMT 2012
Rank12Aligned Residues238
% Identity20%Templatec3l86A_
PDB info PDB header:transferaseChain: A: PDB Molecule:acetylglutamate kinase; PDBTitle: the crystal structure of smu.665 from streptococcus mutans ua159
Resolution2.06 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1.. ......10.........20.........30.........40. ........50.........60.........70........
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Query Sequence  MKT. LVVALGGNALLQRGEALTAENQYRNIASAVPALARLAR. SYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVA
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Template Sequence  MKDIIVIKIGGVASQQL. . . . . . . . . . . . SGDFLSQIKNWQDAGKQLVIVHGGGFAINKLMEENQV. PVKKINGLRVTSK
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TTGGGS
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   1........10....... ..20.........30.........40.........50.... .....60.......
 
   7980.........90.........100.........110.........120.........130.........140.........150........
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Query Sequence  ESQGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASP
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Template Sequence  DDMVLVSHALLDLVGKNLQEKLRQAGVSCQQLKSDIKHVVAADYLDKDTYG. . . . . . . . . . . . . . . . . . . . . . . . . . . YV
Template Known Secondary structure  TTTT


SGGGGGTS
B...........................SB
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   68.70.........80.........90.........100.........110........ .120
 
   159160.........170.........180.........190.........200.........210.........220.........230........
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Query Sequence  QPRKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRA
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Template Sequence  GDVTHINKRVIEEFLENRQIPILA. . . . . SLGYSKEGDMLNINADYLATAVAVALAADKLILMTNVKGVL. . . . . ENGAV
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   121........130.........140.... .....150.........160.........170.........180..... ....190
 
   239240.........250.... .....260.........270.........280.........290......
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Query Sequence  IRHATPDELAPFAKAD. . . GSMGPNVTAVSGYVRSRGKPAWIGALSRIEETLAGEAGTCIS
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Template Sequence  LEKITSHQVQEKIDTAVITAGMIPKIESAAKTVAAGVGQVLIGDNL. . . . . . . . LTGTLIT
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GGGSTTSS
TTTT
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   191........200.........210.........220.........230...... ...240...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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