Job Description P37306 Confidence 100.00% Date Thu Jan 5 11:55:07 GMT 2012 Rank 40 Aligned Residues 218 % Identity 18% Template c2va1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:uridylate kinase; PDBTitle: crystal structure of ump kinase from ureaplasma parvum Resolution 2.50 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	L	V	V	A	L	G	G	N	A	L	L	Q	R	G	E	A	L	T	A	E	N	Q	Y	R	N	I	A	S	A	V	P	A	L	A	R	L	A	R	S	Y	R	L	A	I	V	H	G	N	G	P	Q	V	G	L	L	A	L	Q	N	L	A	W	K	E	V	E	P	Y	P	L	D	V	L	V	A	E	S	Q
Query Conservation
Alig confidence																						.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	R	I	V	I	K	I	S	G	A	C	L	K	Q	N	D	S	S	I	I	.	.	.	D	F	I	K	I	N	D	L	A	E	Q	I	E	K	I	S	K	K	Y	I	V	S	I	V	L	G	G	G	N	I	W	R	G	S	I	A	K	E	L	.	.	.	.	.	.	.	.	.	.	.	D	M	D	R	N	L	A
Template Known Secondary structure		S								G	G	G	G		S	S	T	T		S	S	.	.	.																T	T	T	S									T	T	T									T	.	.	.	.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure																						.	.	.																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.				.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.												.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	M	I	G	Y	M	L	A	Q	S	L	S	A	Q	P	Q	M	P	P	V	T	T	V	L	T	R	I	E	V	S	P	D	D	P	A	F	L	Q	P	E	K	F	I	G	P	V	Y	Q	P	E	E	Q	E	A	L	E	A	A	Y	G	W	Q	M	K	R	D	G	K	Y	L	R	R	V	V	A	S	P	Q	P	R
Query Conservation
Alig confidence																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	N	M	G	M	M	A	T	I	I	N	G	L	A	L	E	N	A	L	N	H	L	N	V	N	T	I	V	L	S	A	I	K	C	D	K	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V
Template Known Secondary structure																						T	T	T								S	S			T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																																											.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		K	I	L	D	S	E	A	I	E	L	L	L	K	E	G	H	V	V	I	C	S	G	G	G	G	V	P	V	T	D	D	G	A	G	S	E	A	V	I	D	K	D	L	A	A	A	L	L	A	E	Q	I	N	A	D	G	L	V	I	L	T	D	.	A	D	A	V	Y	E	N	W	G	T	P	Q	Q	R	A	I	R
Query Conservation																																																																.
Alig confidence																													.	.	.	.	.	.	.	.	.	.																										.											.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Sequence		H	E	S	S	A	N	N	I	K	K	A	I	E	K	E	Q	V	M	I	F	V	A	G	T	G	F	P	.	.	.	.	.	.	.	.	.	.	Y	F	T	T	D	S	C	A	A	I	R	A	A	E	T	E	S	S	I	I	L	M	G	K	N	G	V	D	G	V	Y	D	S	D	F	Y	.	.	.	.	.	.	E
Template Known Secondary structure															T	T							S	T	T	S	S	S	.	.	.	.	.	.	.	.	.	.	S															T		S							S	S			S	B		S				B	.	.	.	.	.	.	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.											.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170							.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.				280	.	.	.	.	.	.	.	.	.	290		.	.	.	.	.	.
Predicted Secondary structure																																									.	.	.												.
Query SS confidence																																									.	.	.												.
Query Sequence		H	A	T	P	D	E	L	A	P	F	A	K	A	D	G	S	M	G	P	N	V	T	A	V	S	G	Y	V	R	S	R	G	K	P	A	W	I	G	A	.	.	.	L	S	R	I	E	E	T	L	A	G	E	.	A	G	T	C	I	S
Query Conservation																																									.	.	.												.
Alig confidence												.	.	.	.																		.								.	.	.												.
Template Conservation												.	.	.	.																		.
Template Sequence		H	I	T	F	N	M	A	L	T	Q	.	.	.	.	N	L	K	V	M	D	A	T	A	L	A	L	C	Q	E	N	N	.	I	N	L	L	V	F	N	I	D	K	P	N	A	I	V	D	V	L	E	K	K	N	K	Y	T	I	V	S
Template Known Secondary structure												.	.	.	.	T			S	S											T	T	.								S	S	S	T	T							T	T		S
Template Predicted Secondary structure												.	.	.	.																		.
Template SS confidence
		180	.	.	.	.	.	.	.	.	.					190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions