Job Description P37306 Confidence 100.00% Date Thu Jan 5 11:55:07 GMT 2012 Rank 5 Aligned Residues 252 % Identity 26% Template c2rd5A_ PDB info PDB header:protein binding Chain: A: PDB Molecule:acetylglutamate kinase-like protein; PDBTitle: structural basis for the regulation of n-acetylglutamate kinase by pii2 in arabidopsis thaliana Resolution 2.51 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.		.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																										.
Query SS confidence																																										.
Query Sequence		K	T	L	V	V	A	L	G	G	N	A	L	L	Q	R	G	E	A	L	T	A	E	N	Q	Y	R	N	I	A	S	A	V	P	A	L	A	R	L	A	R	.	S	Y	R	L	A	I	V	H	G	N	G	P	Q	V	G	L	L	A	L	Q	N	L	A	W	K	E	V	E	P	Y	P	L	D	V	L	V	A	E	S
Query Conservation																																										.
Alig confidence																		.	.	.	.	.	.	.	.	.	.															.																					.
Template Conservation																		.	.	.	.	.	.	.	.	.	.																																				.
Template Sequence		K	T	I	V	V	K	Y	G	G	A	A	M	T	S	P	E	.	.	.	.	.	.	.	.	.	.	L	K	S	S	V	V	S	D	L	V	L	L	A	C	V	G	L	R	P	I	L	V	H	G	G	G	P	D	I	N	R	Y	L	K	Q	.	L	N	I	P	A	E	F	R	D	G	L	R	V	T	D	A	T	T
Template Known Secondary structure										T								.	.	.	.	.	.	.	.	.	.															T	T																				.	T	T							T	T				B
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.																																				.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.		.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	G	M	I	G	Y	M	L	A	Q	S	L	S	A	Q	P	Q	M	P	P	V	T	T	V	L	T	R	I	E	V	S	P	D	D	P	A	F	L	Q	P	E	K	F	I	G	P	V	Y	Q	P	E	E	Q	E	A	L	E	A	A	Y	G	W	Q	M	K	R	D	G	K	Y	L	R	R	V	V	A	S	P	Q	P
Query Conservation
Alig confidence																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	E	I	V	S	M	V	L	V	G	K	V	N	K	N	L	V	S	L	I	N	A	A	G	A	T	A	V	G	L	S	G	H	D	G	R	L	L	T	A	R	P	V	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	S	A	Q	L	G	F	V	G	E
Template Known Secondary structure												T												T	T	S							T	T	G	G	G								T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T					B	S
Template Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.																											.	150	.	.	.	.	.	.	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		R	K	I	L	D	S	E	A	I	E	L	L	L	K	E	G	H	V	V	I	C	S	G	G	G	G	V	P	V	T	D	D	G	A	G	S	E	A	V	I	D	K	D	L	A	A	A	L	L	A	E	Q	I	N	A	D	G	L	V	I	L	T	D	A	D	A	V	Y	E	N	W	G	T	P	Q	Q	R	A	I	R
Query Conservation
Alig confidence																								.	.	.	.	.																																																.
Template Conservation																								.	.	.	.	.																																																.
Template Sequence		V	A	R	V	D	P	S	V	L	R	P	L	V	D	Y	G	Y	I	P	V	I	A	.	.	.	.	.	S	V	A	A	D	D	S	G	Q	A	Y	N	I	N	A	D	T	V	A	G	E	L	A	A	A	L	G	A	E	K	L	I	L	L	T	D	V	A	G	I	L	E	N	K	E	D	P	.	S	S	L	I	K
Template Known Secondary structure							G	G	G							T	T							.	.	.	.	.	S					T	T	S																			T		S							S	S	S	S			S	S	S	S		T	.	T	S
Template Predicted Secondary structure																								.	.	.	.	.																																																.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180						.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.		.	.	230	.	.
		241	.	.	.	.	.	.	.	.	250	.	.	.	.				.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.					.	.	.	.	.	.	.	290		.	.	.	.	.	.
Predicted Secondary structure																.	.	.																													.	.	.	.									.
Query SS confidence																.	.	.																													.	.	.	.									.
Query Sequence		H	A	T	P	D	E	L	A	P	F	A	K	A	D	.	.	.	G	S	M	G	P	N	V	T	A	V	S	G	Y	V	R	S	R	G	K	P	A	W	I	G	A	L	S	R	.	.	.	.	I	E	E	T	L	A	G	E	.	A	G	T	C	I	S
Query Conservation																.	.	.																													.	.	.	.									.
Alig confidence																.	.	.																													.	.	.	.									.
Template Conservation
Template Sequence		E	I	D	I	K	G	V	K	K	M	I	E	D	G	K	V	A	G	G	M	I	P	K	V	K	C	C	I	R	S	L	A	Q	G	V	K	T	A	S	I	I	D	G	R	R	Q	H	S	L	L	H	E	I	M	S	D	E	G	A	G	T	M	I	T
Template Known Secondary structure														T	T	S	S		T	T														T	T		S							T	T	S	T	T								S	S	S		S
Template Predicted Secondary structure
Template SS confidence
		233	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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