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Job DescriptionP37306
Confidence100.00%DateThu Jan 5 11:55:07 GMT 2012
Rank7Aligned Residues244
% Identity18%Templatec2r98A_
PDB info PDB header:transferaseChain: A: PDB Molecule:putative acetylglutamate synthase; PDBTitle: crystal structure of n-acetylglutamate synthase (selenomet2 substituted) from neisseria gonorrhoeae
Resolution2.40 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40. ........50.........60.........70.........80
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Query Sequence  KTLVVALGGNALLQRGEALTAENQYRNIASAVPALARLAR. SYRLAIVHGNGPQVGLLALQNLAWKEVEPYPLDVLVAES
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Template Sequence  TTLVAGIDGRLLEGG. . . . . . . . . . . TLNKLAADIGLLSQLGIRLVLIHGAYHFLDRLAAA. QGRTPHYCRGLRVTDETS
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GGGSSSS...........TT


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TT
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   24.....30........ .40.........50.........60.........70... ......80.........90.
 
   81........90.........100.........110.........120.........130.........140.........150.........160
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Query Sequence  QGMIGYMLAQSLSAQPQMPPVTTVLTRIEVSPDDPAFLQPEKFIGPVYQPEEQEALEAAYGWQMKRDGKYLRRVVASPQP
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Template Sequence  LGQAQQF. AGTVRSRFEAALCGSSVPLVSGNFLT. . . . . . . . . . . . . . . . . . . . . . . . . . . . . ARPIGVIDGTDXEYAGV
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   92...... .100.........110.........120.... .....130.........140.
 
   161........170.........180.........190.........200.........210.........220.........230.........240
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Query Sequence  RKILDSEAIELLLKEGHVVICSGGGGVPVTDDGAGSEAVIDKDLAAALLAEQINADGLVILTDADAVYENWGTPQQRAIR
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Template Sequence  IRKTDTAALRFQLDAGNIVWXP. . . . . PLGHSYGGKTFNLDXVQAAASVAVSLQAEKLVYLTLSDGISRP. . . . DGTLAE
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TT

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   150.........160.........170. ........180.........190.........200.........210.... .....220
 
   241........250.... .....260.........270.........280.. .......290 ......
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Query Sequence  HATPDELAPFAKAD. GSMGPNVTAVSGYVRSRGKPAWIGALSR. . . . IEETLAGE. AGTCIS
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Template Sequence  TLSAQEAQSLAEHAASETRRLISSAVAALEGGVHRVQILNGAADGSLLQELFTRNGIGTSIA
Template Known Secondary structure  TTS
TT
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   221........230.........240.........250.........260.........270.........280..
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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