Job Description P37306 Confidence 100.00% Date Thu Jan 5 11:55:07 GMT 2012 Rank 33 Aligned Residues 277 % Identity 14% Template c2cdqB_ PDB info PDB header:transferase Chain: B: PDB Molecule:aspartokinase; PDBTitle: crystal structure of arabidopsis thaliana aspartate kinase2 complexed with lysine and s-adenosylmethionine Resolution 2.85 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.							.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																																																															.	.	.	.	.	.
Query SS confidence																																																															.	.	.	.	.	.
Query Sequence		K	T	L	V	V	A	L	G	G	N	A	L	L	Q	R	G	E	A	L	T	A	E	N	Q	Y	R	N	I	A	S	A	V	P	A	L	A	R	L	A	R	S	Y	R	L	A	I	V	H	G	N	G	P	Q	V	G	L	L	A	L	Q	N	.	.	.	.	.	.	L	A	W	K	E	V	E	P	Y	P	L	D	V
Query Conservation																																																															.	.	.	.	.	.
Alig confidence																	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	C	V	M	K	F	G	G	S	S	V	A	S	A	.	.	.	.	.	.	.	.	.	.	E	R	M	K	E	V	A	D	L	I	L	T	F	P	E	E	S	P	V	I	V	L	S	A	M	G	K	T	T	N	N	L	L	L	A	G	E	K	A	V	S	C	G	V	S	N	A	S	E	I	E	E	L	S	I
Template Known Secondary structure										G	G	G	G	S	S		.	.	.	.	.	.	.	.	.	.														T	T										S	T	T																	G	G	G	S	T	T
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		27	.	.	30	.	.	.	.	.	.	.	.	.	40	.											.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.					.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																			.	.	.	.							.
Query SS confidence																																			.	.	.	.							.
Query Sequence		L	V	A	E	S	Q	G	M	I	G	Y	M	L	A	Q	S	L	S	A	Q	P	Q	M	P	P	V	T	T	V	L	T	R	I	.	.	.	.	E	V	S	P	D	D	.	P	A	F	L	Q	P	E	K	F	I	G	P	V	Y	Q	P	E	E	Q	E	A	L	E	A	A	Y	G	W	Q	M	K	R	D	G	K	Y
Query Conservation																																			.	.	.	.							.
Alig confidence																																			.	.	.	.							.
Template Conservation
Template Sequence		I	K	E	L	H	I	R	T	V	K	E	L	N	I	D	P	S	V	I	L	T	Y	L	E	E	L	E	Q	L	L	K	G	I	A	M	M	K	E	L	T	L	R	T	R	D	Y	L	V	S	F	G	E	C	L	S	T	R	I	F	A	A	Y	L	N	T	I	G	V	K	A	R	Q	Y	D	A	F	E	I	G	F
Template Known Secondary structure														T			T																					T																													T	T								T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.						.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.
Query SS confidence																							.	.	.	.	.
Query Sequence		L	R	R	V	V	A	S	P	Q	P	R	K	I	L	D	S	E	A	I	E	L	.	.	.	.	.	L	L	K	E	G	H	V	V	I	C	S	G	G	G	G	V	P	V	T	D	D	G	A	G	S	E	A	V	I	D	K	D	L	A	A	A	L	L	A	E	Q	I	N	A	D	G	L	V	I	L	T	D	A	D
Query Conservation																							.	.	.	.	.
Alig confidence																							.	.	.	.	.
Template Conservation
Template Sequence		I	T	T	D	D	F	T	N	G	D	I	L	E	A	T	Y	P	A	V	A	K	R	L	Y	D	D	W	M	H	D	P	A	V	P	I	V	T	G	F	L	G	K	G	W	K	T	G	A	V	T	T	L	G	R	G	G	S	D	L	T	A	T	T	I	G	K	A	L	G	L	K	E	I	Q	V	W	K	D	V	D
Template Known Secondary structure			B		S		S	T	T			B		T	T																S								S	S					T	T	T								S	S													T	T		S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		177	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		226	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.		.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure										.	.																										.
Query SS confidence										.	.																										.
Query Sequence		A	V	Y	E	N	W	G	T	.	.	P	Q	Q	R	A	I	R	H	A	T	P	D	E	L	A	P	F	A	K	A	D	G	S	M	G	.	P	N	V	T	A	V	S	G	Y	V	R	S	R	G	K	P	A	W	I	G	A	L	S	R	I	E	E	T	L	A	G	E	A	G	T	C	I	S
Query Conservation										.	.																										.
Alig confidence										.	.																										.			.	.	.																						.	.	.	.	.
Template Conservation																																								.	.	.																						.	.	.	.	.
Template Sequence		G	V	L	T	C	D	P	T	I	Y	K	R	A	T	P	V	P	Y	L	T	F	D	E	A	A	E	L	A	Y	F	G	A	Q	V	L	H	P	Q	.	.	.	S	M	R	P	A	R	E	G	E	I	P	V	R	V	K	N	S	Y	N	P	K	.	.	.	.	.	A	P	G	T	I	I	T
Template Known Secondary structure		S	S	B	S	S		T	T	T		T	T			B											T	T	T	T	T	S	S	S				G	G	.	.	.	G	G						T	T								T	T	S	T	T	.	.	.	.	.	S
Template Predicted Secondary structure																																								.	.	.																						.	.	.	.	.
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.				.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.						.	.	.	.	320	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions