Job Description P0AFL6 Confidence 81.12% Date Thu Jan 5 11:26:41 GMT 2012 Rank 107 Aligned Residues 104 % Identity 16% Template d1vqra_ SCOP info HD-domain/PDEase-like HD-domain/PDEase-like modified HD domain Resolution 2.25

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.					.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.										.	.	.	.
Predicted Secondary structure																																																	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		S	E	Q	A	R	R	V	L	D	T	T	M	Q	M	Y	E	Q	W	R	E	Q	Q	P	K	L	A	H	P	Q	L	E	A	L	L	R	W	A	A	M	L	H	E	V	G	L	N	I	.	.	.	.	N	H	S	G	L	H	R	H	S	A	Y	I	L	Q	N	S	.	.	.	.	.	.	.	.	.	D	L	P	G
Query Conservation																																																	.	.	.	.																	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.																						.	.	.	.																	.	.	.	.	.	.	.	.	.
Template Conservation																				.	.	.	.	.	.	.	.
Template Sequence		L	K	T	C	N	E	E	A	T	F	I	A	N	W	L	N	D	E	.	.	.	.	.	.	.	.	D	K	K	L	S	H	L	L	V	P	C	A	X	L	L	R	L	G	I	V	I	F	S	N	F	L	I	Q	N	H	K	D	K	D	F	L	A	F	L	N	K	N	E	N	L	A	L	A	E	N	E	F	L	G
Template Known Secondary structure																	T	T	T	.	.	.	.	.	.	.	.																													T	T																							T	S
Template Predicted Secondary structure																				.	.	.	.	.	.	.	.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.									.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		397	.	.	400	.	.	.	.	.	.	.												.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	Q	E	Q	Q	L	M	M	A	T	.	.	.	.	.	.	.	.	.	.	.	L	V	R	Y	H	R	K	A	I	K	L	D	D	L	P	R	F	T	L	F	K	K	K	Q	F	L	P	L	I	Q	L	L	R	L	G	V	L	L	N	N	Q	R	Q	A
Query Conservation													.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.
Template Sequence		V	D	H	I	S	F	L	G	F	L	L	H	R	W	N	F	D	D	V	L	I	E	S	I	C	F	V	R	T	P	H	A	A	R	E	K	V	K	.	.	.	.	.	.	.	.	.	.	K	S	A	Y	A	L	A	I	T	D	H	L	F	A	P	H	D	G
Template Known Secondary structure		S													T	T											T	T	T		G	G	G	S		T	T	T		.	.	.	.	.	.	.	.	.	.															T	T	T	T
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions