Job Description P0AFL6 Confidence 83.88% Date Thu Jan 5 11:26:41 GMT 2012 Rank 102 Aligned Residues 100 % Identity 21% Template c3memA_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:putative signal transduction protein; PDBTitle: crystal structure of a putative signal transduction protein2 (maqu_0641) from marinobacter aquaeolei vt8 at 2.25 a resolution Resolution 2.25 Å

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		330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.				.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure																																																													.	.	.																.	.	.
Query SS confidence																																																													.	.	.																.	.	.
Query Sequence		S	E	Q	A	R	R	V	L	D	T	T	M	Q	M	Y	E	Q	W	R	E	Q	Q	P	K	L	A	H	P	Q	L	E	A	L	L	R	W	A	A	M	L	H	E	V	G	L	N	I	N	H	S	G	L	H	R	H	S	A	Y	I	.	.	.	L	Q	N	S	D	L	P	G	F	N	Q	E	Q	Q	L	.	.	.
Query Conservation																																																													.	.	.																.	.	.
Alig confidence																										.	.				.	.	.																												.	.	.																.	.	.
Template Conservation																										.	.				.	.	.
Template Sequence		W	Q	Q	A	I	W	Q	A	Q	S	A	G	I	L	A	S	X	X	P	R	G	Q	R	P	.	.	L	F	G	.	.	.	L	A	Y	L	A	G	L	L	H	N	F	G	H	L	V	L	A	Q	V	F	P	P	H	F	K	L	V	C	R	S	L	E	V	S	P	H	I	D	S	S	V	I	E	H	Y	L	L	G
Template Known Secondary structure																			S		G	G	G			.	.				.	.	.									T	T	T									S															T	T	S											S
Template Predicted Secondary structure																										.	.				.	.	.
Template SS confidence
		279	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.			.	.	.				.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.
																				404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	M	A	T	L	V	R	Y	H	R	K	A	I	K	L	D	D	L	P	R	F	T	L	F	K	K	K	Q	F	L	P	L	I	Q	L	L	R	L	G	V	L	L
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																								.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	T	R	E	Q	I	A	A	Q	L	X	E	N	W	G	X	P	D	E	V	T	L	A	I	R	Y	Q	K	N	P	A	Y	D	G	P	H	N	V	.	.	.	.	.	.	.	.	.	.	.	Y	A	R	L	L	W	L	G	R	Q	L
Template Known Secondary structure		S													T	T												T	T		T	T			S	T	T			.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		354	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.												.	.	.	.	.	.	.	.	400	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions