 |
Job Description | P0AFL6 | Confidence | 84.62% | Date | Thu Jan 5 11:26:41 GMT 2012 |
Rank | 99 | Aligned Residues | 89 |
% Identity | 16% | Template | c3m1tA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:putative phosphohydrolase; |
PDBTitle: crystal structure of putative phosphohydrolase (yp_929327.1) from2 shewanella amazonensis sb2b at 1.62 a resolution
|
Resolution | 1.62 Å |
|
 |
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
380 |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
Query Sequence |   |
S | E | Q | A | R | R | V | L | D | T | T | M | Q | M | Y | E | Q | W | R | E | Q | Q | P | K | L | A | H | P | Q | L | E | A | L | L | R | W | A | A | M | L | H | E | V | G | L | N | I | N | H | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G |
Query Conservation |   |
  |   |
|
|   |   |
|   |   |   |
|   |   |
|
|
|   |
|   |   |   |
|   |
|   |   |   |   |   |   |
|   |
|
|   |   |
|
|   |
|
|
|
|
|   |   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
Template Conservation |   |
|   |
|
|   |   |   |
|   |   |
|   |   |
|
|   |   |   | . | . | . | . | . | . | . | . |   | . |   |   |   |
|   |
|   |   |
|
|
|
|
|
|
|
|   |
|   |
|   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
Template Sequence |   |
W | G | N | T | F | E | V | A | I | I | C | Q | E | L | A | K | R | L | . |
. |
. |
. |
. |
. |
. |
. |
G | . |
T | L | P | E | E | A | F | T | C | G | I | L | H | S | I | G | E | L | L | I | V | N | G | D | P | A | V | A | A | T | I | S | A | A | V | A | D | G | A | D | R | N | L | X | E | K | E | L | L | G | Y | D |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | T | . | S |
|  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . |
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
106 | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
|
|
. | |
. | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
  |
  |   |
381 | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | H | R | H | S | A | Y | I | L | Q | N | S | D | L | P | G | F | N | Q | E | Q | Q | L | M | M | A | T | L | V | R | Y | H | R | K | A | I | K | L | D | D | L | P | R | F | T | L | F | K | K | K | Q | F | L | P | L | I | Q | L | L | R | L | G | V | L | L |
Query Conservation |   |
  |   |
|
|
|   |
|
|
|   |   |
|   |
|   |
|   |
|   |   |
|   |   |   |
|
|   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|
|
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
| . | . | . | . | . | . | . |   |   |
|   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . |
|   |   |   |
|   |   |
|   |   |
|
Template Sequence |   |
N | A | E | I | G | A | L | L | A | Q | S | W | K | F | T | . |
. |
. |
. |
. |
. |
. |
P | H | L | V | K | G | I | Q | F | Q | N | H | P | K | S | A | E | P | Y | S | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | A | G | X | L | A | X | A | K | Q | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  | T | T |
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T | T |
| G | G | G |
| S | S |
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
177 | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 220 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|