Job Description P0AFL6 Confidence 31.65% Date Thu Jan 5 11:26:41 GMT 2012 Rank 186 Aligned Residues 91 % Identity 9% Template c3ljvA_ PDB info PDB header:transcription Chain: A: PDB Molecule:mmoq response regulator; PDBTitle: crystal structure of mmoq response regulator (fragment 29-302) from2 methylococcus capsulatus str. bath, northeast structural genomics3 consortium target mcr175m Resolution 2.60 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.									.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.
Query Sequence		E	A	L	L	R	W	A	A	M	L	H	E	V	G	L	N	I	N	H	S	G	L	H	R	H	S	A	Y	I	L	Q	N	S	D	L	P	G	F	N	Q	E	Q	Q	L	.	.	.	.	.	.	.	.	M	M	A	T	L	V	R	Y	H	R	K	A	I	K	L	D	D	L	P	R	F	T	L	F	K	K	K	Q
Query Conservation																																														.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	K	E	A	F	T	L	G	L	L	A	D	V	G	R	L	A	L	A	T	A	W	P	E	E	Y	S	E	C	L	R	K	A	D	G	E	A	L	I	A	L	E	R	E	R	F	A	T	D	H	D	E	L	T	R	X	L	L	T	D	W	G	F	P	Q	V	F	I	D	A	L	Q	L	S	Q	Q	T	G	R	F
Template Known Secondary structure												T	T																	T	T	S	S			T												S	S													T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
		432	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450
Predicted Secondary structure
Query SS confidence
Query Sequence		F	L	P	L	I	Q	L	L	R	L	G	V	L	L	N	N	Q	R	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	R	Q	L	A	L	A	Q	H	I	A	D	H	R	L	G	D	E	D
Template Known Secondary structure																			T	T
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions