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Job DescriptionP0AFL6
Confidence100.00%DateThu Jan 5 11:26:41 GMT 2012
Rank2Aligned Residues467
% Identity19%Templatec3hi0B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:putative exopolyphosphatase; PDBTitle: crystal structure of putative exopolyphosphatase (17739545) from2 agrobacterium tumefaciens str. c58 (dupont) at 2.30 a resolution
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   11........20.........30.........40.........50.........60.........70.........80.........90
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Query Sequence  QEFAAVDLGSNSFHMVIARVVDGAMQIIGRLKQRVHLADGLGPDNMLSEEAMTRGLNCLSLFAERLQGFSPASVCIVGTH
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Template Sequence  APVSVIDIGSNSVRLVVYEGLSRAPAVLFNEKVLCGLGKGLALTGRXHEEGVTRALXALRRFHVLSEQAQAQKLYVLATA
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SS
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   14.....20.........30.........40.........50.........60.........70.........80.........90...
 
   91........100.........110.........120.........130.........140.........150.........160.........170
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Query Sequence  TLRQALNATDFLKRAEKVIPYPIEIISGNEEARLIFMGVEHTQPEKGRKLVIDIGGGSTELVIGENFEPILVESRRMGCV
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Template Sequence  AAREAENGPDFIREAEAILGCEIEVLSGEKEALYSAYGVISGFYQPD. GIAGDLGGGSLELIDIKDKSCGEGITLPLGGL
Template Known Secondary structure  GGGG
TTTS



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   94.....100.........110.........120.........130.........140 .........150.........160.........170..
 
   171........180.........190.........200.........210.........220.........230.. .......240....
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Query Sequence  SFAQLYFPGGVINKENFQRARMAAAQKLETLTWQFRIQGWNVAMGASGTIKAAHEVLMEMGE. . . . . . KDGIITPERLEK
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Template Sequence  RLSEQSDGSLE. . . . . . . KAATIARKHVKSFAKLLAAGEGRTFYAVGGTWRNIAKLHXEISGYPLHXXQGYELPLEEXLN
Template Known Secondary structure  TTT
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   173......180... ......190.........200.........210.........220.........230.........240.....
 
   245....250.........260.........270.........280.........290.........300........ .310.........320...
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Query Sequence  LVKEVLRHRNFASLSLPGLSEERKTVFVPGLAILCGVFDALAIRELRLSDGALREGVLYEMEGR. FRHQDVRSRTASSLA
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Template Sequence  F. . . . . . . . . . . LEEVIVSRDNRRSLLPFGAIAXREVLRAXKPAKIAFSAQGVREGYLYSLLTEAERESDPLLVAADELA
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   246 ...250.........260.........270.........280.........290.........300.........310....
 
   324.....330.........340.........350.........360.........370.........380.........390.........400...
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Query Sequence  NQYHIDSEQARRVLDTTMQMYEQWREQQPKLAHPQLEALLRWAAMLHEVGLNINHSGLHRHSAYILQNSDLPGFNQEQQL
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Template Sequence  ILRARSPEHARELADWSGRTFPVFGIDE. . . . TEEESRYRQAACLLADISWRAHPDYRGLQALNIIAHSSFVAITHPGRA
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S
GGGGT


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   326...330.........340.........350... ......360.........370.........380.........390.........400.
 
   404.....410.........420... ......430.........440.........450.........460..... ....470.......
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Query Sequence  MMATLVRYHRKAIKLDDLPR. . . . . FTLFKKKQFLPLIQLLRLGVLLNNQRQATTTPPTLTLITDDS. HWTLRFPHDWFS
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Template Sequence  YIALANYYRFEGLNDNGTTEPLAAXAGERLQELGKLLGGLLRVVYLFSASXPGVVDHLKFRKSDNPDIDLEFVVPHDYCD
Template Known Secondary structure 
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   402.......410.........420.........430.........440.........450.........460.........470.........480.
 
   478.480.........490.........500...
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Query Sequence  QNALVLLDLEKEQEYWEGVAGWRLKI
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Template Sequence  . . . FAGERLDGRLQQLAKLTGKRLAF
Template Known Secondary structure  ...G
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   482.......490.........500....
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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