Job Description P0AFL6 Confidence 97.86% Date Thu Jan 5 11:26:41 GMT 2012 Rank 26 Aligned Residues 154 % Identity 13% Template c3dwlB_ PDB info PDB header:structural protein Chain: B: PDB Molecule:actin-related protein 3; PDBTitle: crystal structure of fission yeast arp2/3 complex lacking the arp22 subunit Resolution 3.78 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.																										.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	G	R	L	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	E	E	A	M	T	R	G	L	N	C	L
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																									.	.	.	.	.	.
Template Sequence		I	M	D	N	G	T	G	Y	S	K	L	G	Y	A	G	N	D	A	P	S	Y	V	F	.	.	.	.	.	.	P	T	V	I	A	T	R	T	E	D	L	D	F	F	I	G	N	D	A	L	K	K	A	S	A	G	Y	S	L	D	Y	P	I	R	H	G	Q	I	E	N	W	D	H	M	E	R	F	W	Q	Q	S
Template Known Secondary structure							S	S							T	T	S	S	S		S				.	.	.	.	.	.										S	S					T						T										S			T	T
Template Predicted Secondary structure																									.	.	.	.	.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.							.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																						.
Query SS confidence																																																																						.
Query Sequence		S	L	F	A	E	R	L	Q	G	F	S	P	A	S	V	C	I	V	G	T	H	T	L	R	Q	A	L	N	A	T	D	F	L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	G	N	E	E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	.	R	K	L	V	I	D	I	G	G	G	S
Query Conservation																																																																						.
Alig confidence		.	.																																																																			.
Template Conservation		.	.
Template Sequence		.	.	L	F	K	Y	L	R	C	E	P	E	D	H	Y	F	L	L	T	E	P	P	L	N	P	P	E	N	R	E	N	T	A	E	I	M	F	E	S	F	N	C	A	G	L	Y	I	A	V	Q	A	V	L	A	L	A	A	S	W	T	S	S	K	V	T	D	R	S	L	T	G	T	V	V	D	S	G	D	G	V
Template Known Secondary structure		.	.			T	T	S				G	G	G									T	T																T	T			S														G	G	G	G	S	T	T	T		S											S	S	S
Template Predicted Secondary structure		.	.
Template SS confidence
				113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190
		149	150	.	.	.	.	.	.	.	.	.	160			.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure														.	.
Query SS confidence														.	.
Query Sequence		T	E	L	V	I	G	E	N	F	E	P	I	.	.	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y
Query Conservation														.	.
Alig confidence														.	.
Template Conservation
Template Sequence		T	H	I	I	P	V	A	E	G	Y	V	I	G	S	S	I	K	T	M	P	L	A	G	R	D	V	T	Y	F	V
Template Known Secondary structure									T	T				G	G	G					S
Template Predicted Secondary structure
Template SS confidence
		191	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions