Job Description P0AFL6 Confidence 25.18% Date Thu Jan 5 11:26:41 GMT 2012 Rank 195 Aligned Residues 212 % Identity 12% Template c3djcA_ PDB info PDB header:transferase Chain: A: PDB Molecule:type iii pantothenate kinase; PDBTitle: crystal structure of pantothenate kinase from legionella pneumophila Resolution 2.40 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.			.	.	.	.	.	.	.	.	90
Predicted Secondary structure																																																																							.	.
Query SS confidence																																																																							.	.
Query Sequence		F	A	A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	G	R	L	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	S	E	E	A	M	T	R	G	L	N	C	L	S	L	F	A	E	R	L	Q	G	F	S	P	.	.	A	S	V	C	I	V	G	T	H
Query Conservation																																																																							.	.
Alig confidence																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.	.
Template Conservation																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	C	I	D	V	G	N	S	H	I	Y	G	G	V	F	D	.	.	G	D	E	I	K	L	R	F	R	H	T	S	K	V	S	T	S	D	E	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	F	L	K	S	V	L	R	E	N	N	C	S	P	E	T	I	R	K	I	A	I	C
Template Known Secondary structure									S	S									.	.	T	T											S									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.									T	T	T			G	G	G
Template Predicted Secondary structure																			.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.																		.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		T	L	R	Q	A	L	N	A	T	D	F	L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	E	E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S	T	E	L	V	I
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				.																	.												.
Template Conservation						.																																											.																	.												.
Template Sequence		S	V	V	P	.	Q	V	D	Y	S	L	R	S	A	C	V	K	Y	F	S	I	D	P	F	L	L	Q	A	G	V	K	T	G	L	N	I	K	Y	R	N	P	V	E	V	G	A	D	.	R	I	A	N	A	I	A	A	T	H	S	F	P	N	Q	N	.	I	I	V	I	D	F	G	T	A	T	T	.	F	C	A
Template Known Secondary structure			S			.														T									S	S	S									S	S	G	G	G	S				.												S	T	T	S		.							S	S				.
Template Predicted Secondary structure						.																																											.																	.												.
Template SS confidence
		63	.	.	.		.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.		.	.	.
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																						180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	E	N	F	E	P	I	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y	F	P	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	V	I	N	K	E	N	F	Q	R	A	R	M	A	A	A	Q	K	L	E	T	L	T	W	Q	F	R	I	Q	G	W	N	V
Query Conservation																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	S	H	K	K	A	Y	L	G	G	A	I	L	P	G	L	R	L	S	A	D	A	L	S	K	N	T	A	K	L	P	S	V	E	I	I	K	T	E	S	V	V	G	R	S	T	I	E	S	I	Q	S	G	V	Y	Y	G	V	L	G	A	C	K	E	L	I	Q	R	I	H	H	E	A	F	N	G	D	Q	I	L
Template Known Secondary structure				T	T	S																					S		S	S										S		S			S	S																												T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	G	A	S	G	T	I	K	A	A	H	E	V	L	M	E	M	G	E	K	D	G	I	I	T	P	E	R	L	E	K	L	V	K	E
Query Conservation
Alig confidence															.
Template Conservation															.
Template Sequence		I	L	A	T	G	G	F	A	S	L	F	D	K	.	Q	G	L	Y	D	H	L	V	P	D	L	V	L	Q	G	I	R	L	A	A	M	M
Template Known Secondary structure						S	T	T	G	G	G	G	T	T	.	T	T			S				T	T												T
Template Predicted Secondary structure															.
Template SS confidence
		219	220	.	.	.	.	.	.	.	.	.	230	.		.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions