Job Description P0AFL6 Confidence 97.66% Date Thu Jan 5 11:26:41 GMT 2012 Rank 33 Aligned Residues 261 % Identity 18% Template c3d2fC_ PDB info PDB header:chaperone Chain: C: PDB Molecule:heat shock protein homolog sse1; PDBTitle: crystal structure of a complex of sse1p and hsp70 Resolution 2.30 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																													.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	G	R	L	.	.	.	.	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	S	E	E	A	M	T	R	G	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																													.	.	.	.																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.											.	.	.	.										.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.																								.
Template Sequence		G	L	D	L	G	N	N	N	S	V	L	A	V	A	R	.	.	N	R	G	I	D	I	V	V	N	E	V	S	N	R	S	T	P	S	V	V	G	F	G	.	P	K	N	R	Y	L	G	E	T	G	K	N	K	Q	T	S	N	I	K	N	T	V	A	N	L	K	R	I	I	G	L	D	Y	H	H	P	D	F	E
Template Known Secondary structure							S	S									.	.	T	T								T	T			S	S									.	S	S	S				T							T	T	T		G	G	G									T	T		B	T	T		T	T
Template Predicted Secondary structure																	.	.																								.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
																																								67	.	.	70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	C	L	S	L	F	A	E	R	L	Q	G	F	.	S	P	A	S	V	C	I	V	G	T	H	T	L	R	Q	A	L	N	A	T	D	F	L	K	R	A	E	K
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation
Template Sequence		Q	E	S	K	H	F	T	S	K	L	V	E	L	D	D	K	K	T	G	A	E	V	R	F	A	G	E	K	H	V	F	S	A	T	Q	L	A	A	M	F	I	D	K	V	K	D	T	V	K	Q	D	T	K	A	N	I	T	D	V	C	I	A	V	P	P	W	Y	T	E	E	Q	R	Y	N	I	A	D	A	A	R
Template Known Secondary structure					T	T			S						T	T	S	B								T	T																												S											T	T
Template Predicted Secondary structure
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		108	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.						.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.																												.	.	.	.	.
Query SS confidence																										.	.	.	.	.																												.	.	.	.	.
Query Sequence		V	I	P	Y	P	I	E	I	I	S	G	N	E	E	A	R	L	I	F	M	G	V	E	H	.	.	.	.	.	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S	T	E	L	V	I	G	E	N	F	E	.	.	.	.	.	P	I	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y	F
Query Conservation																										.	.	.	.	.																												.	.	.	.	.
Alig confidence																										.	.	.	.	.																												.	.	.	.	.
Template Conservation
Template Sequence		I	A	G	L	N	P	V	R	I	V	N	D	V	T	A	A	G	V	S	Y	G	I	F	K	T	D	L	P	E	G	E	E	K	P	R	I	V	A	F	V	D	I	G	H	S	S	Y	T	C	S	I	M	A	F	K	K	G	Q	L	K	V	L	G	T	A	C	D	K	H	F	G	G	R	D	F	D	L	A	I	T
Template Known Secondary structure			T	T																											S	S	S												S	S											T	T											T	T		S
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
										178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	P	G	G	V	I	N	K	E	N	F	Q	R	A	R	M	A	A	A	Q	K	L	E	T	L	T	W	Q	F	R	I	Q	G	W	N	V	A	M	G	A	S	G	T	I	K	A	A	H	E	V	L	M	E	M	G	E	K	D	G	I	I	T	P	E	R	L	E	K	L	V	K	E	V
Query Conservation		.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.																																										.	.	.	.	.	.	.	.	.
Template Conservation																																																			.	.	.	.	.	.	.	.	.
Template Sequence		E	H	F	A	D	E	F	K	T	K	Y	K	I	D	I	R	E	N	P	K	A	Y	N	R	I	L	T	A	A	E	K	L	K	K	V	L	S	A	N	T	N	A	P	F	S	V	E	S	V	.	.	.	.	.	.	.	.	.	M	N	D	V	D	V	S	S	Q	L	S	R	E	E	L	E	E	L	V	K	P	L
Template Known Secondary structure												T	S			G	G	G																							S							S	S	S	.	.	.	.	.	.	.	.	.	S	S	S																T
Template Predicted Secondary structure																																																			.	.	.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.										.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
		250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.						.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																																							.	.	.	.	.
Query SS confidence																																							.	.	.	.	.
Query Sequence		L	R	H	R	N	F	A	S	L	S	L	P	G	L	S	E	E	R	K	T	V	F	V	P	G	L	A	I	L	C	G	V	F	D	A	L	A	.	.	.	.	.	I	R	E	L	R	L	S	D	G	A	L	R	E	G	V	L	Y	E	M	E	G	R
Query Conservation																																							.	.	.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	E	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	E	P	V	T	K	A	L	A	Q	A	K	L	S	A	E	E	V	D	F	V	E	I	I	G	G	T	T	R	I	P	T	L	K	Q	S	I	S	E
Template Known Secondary structure			T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T										T	T			G	G	G								S	G	G	G	G	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		314	.	.																						.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions