Job Description P0AFL6 Confidence 97.80% Date Thu Jan 5 11:26:41 GMT 2012 Rank 30 Aligned Residues 164 % Identity 18% Template c2v7zA_ PDB info PDB header:chaperone Chain: A: PDB Molecule:heat shock cognate 71 kda protein; PDBTitle: crystal structure of the 70-kda heat shock cognate protein2 from rattus norvegicus in post-atp hydrolysis state Resolution 3.50 Å

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		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	P	Q	E	F	A	A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		S	K	G	P	A	V	G	I	D	L	G	T	T	Y	S	C	V	G	V	F	Q	.	.	H	G	K	V	E	I	I	A	N	D	Q	G	N	R	T	T	P	S	Y	V	A	F	T	D	T	E	R	L	I	G	D	A	A	K	N	Q	V	A	M	N	P	T	N	T	V	F	D	A	K	R	L	I	G	R	R	F	D
Template Known Secondary structure													S	S									.	.	T	T								S	S	S		S										S	S					S							T	T	T	S		T	T						T	T	T	T	T			T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.			.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
																			39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	L	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	S	E	E	A	M	T	R	G	L	N	C	L	S	L	F	A	E	R	L	Q	G	F	S	P	A	S	V	C	I	V	G	T	H	T	L	R	Q	A	L	N	A	T	D	F
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																								.	.
Template Conservation																																																																										.	.
Template Sequence		D	A	V	V	Q	S	D	M	K	H	W	P	F	M	V	V	N	D	A	G	R	P	K	V	Q	V	E	Y	K	G	E	T	K	S	F	Y	P	E	E	V	S	S	M	V	L	T	K	M	K	E	I	A	E	A	Y	L	G	K	T	V	T	N	A	V	V	T	V	P	A	Y	F	N	.	.	D	S	Q	R	Q	A
Template Known Secondary structure									T	T	S		S	S						T	T									T	T	S																										T	S											T	T			.	.
Template Predicted Secondary structure																																																																										.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.			.	.	.	.	.	.
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.						.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.	.	.	.
Query SS confidence																																																											.	.	.	.	.
Query Sequence		L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	G	N	E	E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S	T	E	L	V	I	G	E	N	F	E	.	.	.	.	.	P	I	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y
Query Conservation																																																											.	.	.	.	.
Alig confidence																																																											.	.	.	.	.
Template Conservation
Template Sequence		A	K	D	A	G	T	I	A	G	L	N	V	L	R	I	I	N	E	P	T	A	A	A	I	A	Y	G	L	D	K	K	V	R	A	E	R	N	V	L	I	F	D	L	G	G	G	T	F	D	V	S	I	L	T	T	E	D	G	I	F	E	V	K	S	T	A	G	D	T	H	L	G	G	E	D	F	D	N	R	M
Template Known Secondary structure										T																	T	T	T	T	S			S	S											S	S											T	T											T	T		S
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions