Job Description P0AFL6 Confidence 57.15% Date Thu Jan 5 11:26:41 GMT 2012 Rank 149 Aligned Residues 190 % Identity 13% Template c2ap1A_ PDB info PDB header:transferase Chain: A: PDB Molecule:putative regulator protein; PDBTitle: crystal structure of the putative regulatory protein Resolution 1.90 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	A	A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	D	G	A	M	Q	I	I	G	R	L	K	Q	R	V	H	L	A	D	G	L	G	P	D	N	M	L	S	E	E	A	M	T	R	G	L	N	C	L	S	L	F	A	E	R	L	Q	G	F	S	P	A	S	V	C	I	V	G	T	H	T	L
Query Conservation
Alig confidence																						.	.	.											.	.	.	.	.	.	.	.																						.	.	.
Template Conservation																						.	.	.											.	.	.	.	.	.	.	.																						.	.	.
Template Sequence		Y	Y	G	F	D	I	G	G	T	K	I	A	L	G	V	F	D	S	T	R	.	.	.	R	L	Q	W	E	K	R	V	P	T	.	.	.	.	.	.	.	.	P	H	T	S	Y	S	A	F	L	D	A	V	C	E	L	V	E	E	A	D	Q	.	.	.	R	F	G	V	K	G	S	V	G	I	G	I	P	G	M
Template Known Secondary structure									S	S									T	T		.	.	.											.	.	.	.	.	.	.	.			S																			.	.	.			T	S									S	S	B
Template Predicted Secondary structure																						.	.	.											.	.	.	.	.	.	.	.																						.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.				.	.	.	.	.	.	.	.	30	.									.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.				.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
		93	.	.	.	.	.	.	100													.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	Q	A	L	N	A	T	D	.	.	.	.	.	.	.	.	.	.	.	.	F	L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	G	N	E	E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S	T	E	L	V	I	G	E	N	F	E	P	I
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.																												.																				.
Template Conservation																																																	.																				.
Template Sequence		P	E	T	E	D	G	T	L	Y	A	A	N	V	P	A	A	S	G	K	P	L	R	A	D	L	S	A	R	L	D	R	D	V	R	L	D	N	D	A	N	C	F	A	L	S	E	A	.	W	D	D	E	F	T	Q	Y	P	L	V	M	G	L	I	L	G	T	G	.	V	G	G	G	L	V	L	N	G	K	P	I
Template Known Secondary structure		S			T	T	S			B		T	T		T	T	T	T	T	S											T	S																	.	T	S	T	T	G	G	G		S								S	S	S	.								T	T
Template Predicted Secondary structure																																																	.																				.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.		.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.		.	.	.	.	.	.	140	.	.	.	.	.
		161	.	.	.	.	.	.	.																																																				.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	V	E	S	R	R	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	V	S	F	A	Q	L	Y	F	P	G	G	V	I	N	K	E	N	F	Q	R
Query Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	G	Q	S	Y	I	T	G	E	F	G	H	M	R	L	P	V	D	A	L	T	L	M	G	F	D	F	P	L	R	R	C	G	C	G	Q	M	G	C	I	E	N	Y	L	S	G	R	G	F	A	W	L	Y	Q	H	Y	Y	D	Q	S	L	Q	A	P	E	I	I	A	L	W	E	Q	G	D	E	Q	A	H	A	H
Template Known Secondary structure				T	T	S		T	T		G	G	G	S	B											T	T	S				B		T	T	S		B	S	B	T					S																											T	T
Template Predicted Secondary structure
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
		190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	M	A	A	A	Q	K	L	E	T	L	T	W	Q	F	R	I	Q	G	W	N	V	A	M	G	A	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	R	Y	L	D	L	L	A	V	C	L	G	N	I	L	T	I	V	D	P	D	L	L	V	I	G	G	G
Template Known Secondary structure																							S						S	G
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions