Job Description P0AFL6 Confidence 97.84% Date Thu Jan 5 11:26:41 GMT 2012 Rank 27 Aligned Residues 164 % Identity 18% Template c1jcgA_ PDB info PDB header:structural protein Chain: A: PDB Molecule:rod shape-determining protein mreb; PDBTitle: mreb from thermotoga maritima, amppnp Resolution 3.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50																	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	E	F	A	A	V	D	L	G	S	N	S	F	H	M	V	I	A	R	V	V	.	.	.	.	.	D	G	A	M	Q	I	I	G	R	L	K	Q	R	V	H	L	A	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	G	P	D	N	M	L	S	E	E	A	M	T	R	G	L	N	C	L
Query Conservation																							.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											.	.
Template Conservation																																																																									.	.
Template Sequence		R	K	D	I	G	I	D	L	G	T	A	N	T	L	V	F	L	R	G	K	G	I	V	V	N	E	P	S	V	I	A	I	D	S	T	T	G	E	I	L	K	V	G	L	E	A	K	N	M	I	G	K	T	P	A	T	I	K	A	I	R	P	M	R	D	G	V	I	A	D	Y	.	.	T	V	A	L	V	M	L
Template Known Secondary structure		S									S	S							T	T	T								S						T	T	T							S					T	T	T	T	S			T	T									T	T			S	S		.	.
Template Predicted Secondary structure																																																																									.	.
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80
		70	.	.	.	.	.	.	.	.	.		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		S	L	F	A	E	R	L	Q	G	F	.	S	P	A	S	V	C	I	V	G	T	H	T	L	R	Q	A	L	N	A	T	D	F	L	K	R	A	E	K	V	I	P	Y	P	I	E	I	I	S	G	N	E	E	A	R	L	I	F	M	G	V	E	H	T	Q	P	E	K	G	R	K	L	V	I	D	I	G	G	G	S
Query Conservation												.
Alig confidence												.																																																			.	.
Template Conservation																																																															.	.
Template Sequence		R	Y	F	I	N	K	A	K	G	G	M	N	L	F	K	P	R	V	V	I	G	V	P	I	G	I	T	D	V	E	R	R	A	I	L	D	A	G	L	E	A	G	A	S	K	V	F	L	I	E	E	P	M	A	A	A	I	G	S	N	L	.	.	N	V	E	E	P	S	G	N	M	V	V	D	I	G	G	G	T
Template Known Secondary structure										T	S			S	S										S	S															T	T	T		S														T	T	T		.	.		S	S	S	S	S									S	S
Template Predicted Secondary structure																																																															.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	L	V	I	G	E	N	F	E	P	I	L	V	E	S	R	R	M	G	C	V	S	F	A	Q	L	Y	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	E	V	A	V	I	S	L	G	S	I	V	T	W	E	S	I	R	I	A	G	D	E	M	D	E	A	I	V	Q
Template Known Secondary structure									T	T									S		S
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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