Return to main results Retrieve Phyre Job Id

Job DescriptionP75862
Confidence9.08%DateThu Jan 5 12:15:12 GMT 2012
Rank36Aligned Residues56
% Identity21%Templated2z0sa1
SCOP infoOB-fold Nucleic acid-binding proteins Cold shock DNA-binding domain-like
Resolution3.20

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   105....110.........120.........130......... 140.........150. ........160
Predicted Secondary structure 
















..







....




Query SS confidence 


































. .











. . . .








Query Sequence  WVPMPGDAACVWLSDTHEQVNLLVVESGENAALCL. . LAQPCVVIAGRA. . . . MQLGDAIKI
Query Conservation       

   
 
        




  
 




..
 
   
   
 ....
 
   


Alig confidence 


































..











....








Template Conservation 
 
  



 
 
  
   
  
 
     
 
  
  
                


 
 
Template Sequence  YVPQAGDVVIGLIQSVGIMNWFVDINSPYVAVLSVQDFLGRPFNPAVDDMQSLLKVGDYIKA
Template Known Secondary structure 



TT


SS
SSSS
TS


TTTT

TTSS
TT
Template Predicted Secondary structure 


































Template SS confidence 





























































   62.......70.........80.........90.........100.........110.........120...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions