Return to main results Retrieve Phyre Job Id

Job DescriptionP75862
Confidence26.11%DateThu Jan 5 12:15:12 GMT 2012
Rank9Aligned Residues78
% Identity15%Templatec1q46A_
PDB info PDB header:translationChain: A: PDB Molecule:translation initiation factor 2 alpha subunit; PDBTitle: crystal structure of the eif2 alpha subunit from2 saccharomyces cerevisia
Resolution2.86 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   102.......110.........120.........130 ......... 140.........150.........160.........170.......
Predicted Secondary structure 















.



...





















Query SS confidence 




























.








. . .





































Query Sequence  GEMWVPMPGDAACVWLSDTHEQVNLLVVE. SGENAALCL. . . LAQPCVVIAGRAMQLGDAIKIMNDRLKPQVNVDSFSLE
Query Conservation          

   
 
        




.  
 




...
 
   
   
 
 
   







 
          
Alig confidence 




























.








...





































Template Conservation 

   

 
 

 
 
  
   
 

 
 

 



 
  



   
        

  
  


 

     
 



Template Sequence  YENKYPEIDDIVMVNVQQIAEMGAYVKLLEYDNIEGMILLSELSRRRIRSIQKLIRVGKNDVAVVLRVDKEKGYIDLSKR
Template Known Secondary structure  SSSSS

TT

SSTTTTTGGGT
SS

SSGGGTS
TT
TTTTST
Template Predicted Secondary structure 




























Template SS confidence 















































































   8.10.........20.........30.........40.........50.........60.........70.........80.......
 
   178.
Predicted Secondary structure 

Query SS confidence 

Query Sequence  QA
Query Conservation    
Alig confidence 

Template Conservation   
Template Sequence  RV
Template Known Secondary structure  T
Template Predicted Secondary structure 
Template SS confidence 

   88.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions