 |
Job Description | P38104 | Confidence | 45.38% | Date | Thu Jan 5 11:57:58 GMT 2012 |
Rank | 385 | Aligned Residues | 113 |
% Identity | 15% | Template | d2cu0a1 |
SCOP info | TIM beta/alpha-barrel
| Inosine monophosphate dehydrogenase (IMPDH)
| Inosine monophosphate dehydrogenase (IMPDH)
|
Resolution | 2.10 |
|
 |
  |   |
218 | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | |
|
|
|
Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|
| . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
Query Sequence |   |
T | P | I | E | A | A | R | F | G | K | S | I | E | D | Y | R | M | F | W | M | E | D | P | T | P | A | E | N | Q | E | C | F | R | L | I | R | Q | H | T | V | T | P | I | A | V | G | E | V | F | N | S | I | W | D | C | K | Q | L | I | E | E | Q | L | I | D | Y | I | R | T | T | L | T | H | A | G | G | . |
. |
. |
. |
Query Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|
|
|
|   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|   |   |   |   |
|
| . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
Template Conservation |   |
  |   |   |   |   |   |   |   |
|   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|   | . |   |   |   |   |
|   |   |   |   |
|
|   |   |
|   |
|   |   |   |
|
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
D | I | K | R | A | I | E | L | D | K | A | G | V | D | V | I | V | V | D | T | A | H | A | H | N | L | K | A | I | K | S | M | K | E | M | R | Q | K | V | D | A | D | F | I | V | G | N | I | A | . |
N | P | K | A | V | D | D | L | T | F | A | D | A | V | K | V | G | I | G | P | G | S | I | C | T | T | R | I | V | A |
Template Known Secondary structure |   |
|  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  |  |
| S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |  |  |  |  |  |  |  |
| . |
|  |  |  |  | T | T |
| T | T | S | S |  |  |  |  |
| S | S |
| S | T | T | B |
|  |  |  |  | T |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
229 | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | |
. | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
  |
  |   |
|
|
|
|
|
|
294 | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
I | T | G | M | R | R | I | A | D | F | A | S | L | Y | Q | V | R | T | G | S | H | G | P | S | D | L | S | P | V | C | M | A | A | A | L | H | F | D | L |
Query Conservation |   |
. | . | . | . | . | . |
|
|   |   |   |   |
|
|   |   |
|   |   |   |
|
|   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |
|
|   |   |
|
|   |
|
Alig confidence |   |
. | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
| . |   |
|
|
|   |   |
|   |
|
|
|
|
|
|
|
|
|
|
Template Sequence |   |
G | V | G | V | P | Q | I | T | A | V | A | M | V | A | D | R | A | Q | E | Y | G | L | Y | V | I | A | . |
D | G | G | I | R | Y | S | G | D | I | V | K | A | I | A | A | G | A |
Template Known Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  | . |  | S |
|
|
| S |  |  |  |  |  |  |  |  |  | T | T |
|
Template Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
308 | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | |
. | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|