Job Description P38104 Confidence 71.16% Date Thu Jan 5 11:57:58 GMT 2012 Rank 295 Aligned Residues 120 % Identity 13% Template d1wdda1 SCOP info TIM beta/alpha-barrel RuBisCo, C-terminal domain RuBisCo, large subunit, C-terminal domain Resolution 1.35

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		196	.	.	.	200	.	.	.	.					.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.							.	240	.	.	.	.	.							.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure											.	.	.	.																																			.	.	.	.	.	.								.	.	.	.	.	.
Query SS confidence											.	.	.	.																																			.	.	.	.	.	.								.	.	.	.	.	.
Query Sequence		F	D	A	V	R	N	K	F	G	.	.	.	.	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	.	.	.	.	.	.	D	P	T	P	A	E	N	.	.	.	.	.	.	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P
Query Conservation											.	.	.	.																																			.	.	.	.	.	.								.	.	.	.	.	.
Alig confidence											.	.	.	.																																			.	.	.	.	.	.								.	.	.	.	.	.
Template Conservation
Template Sequence		I	Q	V	E	R	D	K	L	N	K	Y	G	R	P	L	L	G	C	T	I	K	P	K	L	G	L	S	A	K	N	Y	G	R	A	C	Y	E	C	L	R	G	G	L	D	F	T	D	D	E	N	V	N	S	Q	P	F	M	R	W	R	D	R	F	V	F	C	A	E	A	I	Y	K	S	Q	A	E	T	G	E	I
Template Known Secondary structure										T			S	S								S	S	S	S																	T	T		S	B				T	T		S	S	B	T	T	B																					S	S
Template Predicted Secondary structure
Template SS confidence
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		260	.	.	.	.	.	.	.			.	.	270	.	.	.	.					.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure										.	.								.	.	.	.
Query SS confidence										.	.								.	.	.	.
Query Sequence		I	A	V	G	E	V	F	N	.	.	S	I	W	D	C	K	Q	.	.	.	.	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S
Query Conservation										.	.								.	.	.	.
Alig confidence										.	.								.	.	.	.						.												.
Template Conservation																												.												.
Template Sequence		K	G	H	Y	L	N	A	T	A	G	T	C	E	E	M	I	K	R	A	V	F	A	R	E	L	G	.	V	P	I	V	M	H	D	Y	L	T	G	.	G	F	T	A	N	T	S	L	A	H	Y	C	R	D	N	G	L	L	L	H	I	H	R	A	M
Template Known Secondary structure			B								S	S															T	.		S										.																T								T	T
Template Predicted Secondary structure																												.												.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.		.	.	.	.	.	.	.	.	270	.	.		.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions