Return to main results Retrieve Phyre Job Id

Job DescriptionP38104
Confidence94.56%DateThu Jan 5 11:57:58 GMT 2012
Rank196Aligned Residues130
% Identity14%Templated1vzwa1
SCOP infoTIM beta/alpha-barrel Ribulose-phoshate binding barrel Histidine biosynthesis enzymes
Resolution1.8

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   116...120.........130.........140.........150.........160.........170.........180.........190.....
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  GVMVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKL
Query Conservation   
                        
    


 
                                        
   
Alig confidence 














....













.....................................









Template Conservation    

   


     ....
      


 


.....................................          
Template Sequence  DIKVELSGGIRDDDT. . . . LAAALATGCTRVNL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTAALETPEW
Template Known Secondary structure  SSSS

S....TT
S.....................................

Template Predicted Secondary structure 






....







.....................................






Template SS confidence 















































































   75....80......... 90.........100... ......110...
 
   196...200.........210...... ...220.........230.........240.........250.........260.......
Predicted Secondary structure 








........


















Query SS confidence 




















. . . . . . . .


















































Query Sequence  FDAVRNKFGFNEHLLHDMHHR. . . . . . . . LTPIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQHTVTPIAVGEVFN
Query Conservation 
  

   
    
 



  ........
    
      
    
  



    
      
     



 

   
Alig confidence 




















........


















































Template Conservation          
   
                         
      
      
 

 
 
 
  
      



 


 
Template Sequence  VAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEGCARYVVTDIGPNLELLKNVCAATDRPVVASGGVS
Template Known Secondary structure  GGGTT

SSS




BTT






T
SS
S


Template Predicted Secondary structure 



































Template SS confidence 















































































   114.....120.........130.........140.........150.........160.........170.........180.........190...
 
   268.270..... ....280......
Predicted Secondary structure 
..




Query SS confidence 







. .










Query Sequence  SIWDCKQL. . IEEQLIDYIRT
Query Conservation          ..
     
 
  
Alig confidence 







..










Template Conservation    

      
   






Template Sequence  SLDDLRAIAGLVPAGVEGAIV
Template Known Secondary structure  STTGGGT
Template Predicted Secondary structure 




Template SS confidence 




















   201........210.........220.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions