Job Description P38104 Confidence 31.43% Date Thu Jan 5 11:57:58 GMT 2012 Rank 438 Aligned Residues 143 % Identity 10% Template d1kbia1 SCOP info TIM beta/alpha-barrel FMN-linked oxidoreductases FMN-linked oxidoreductases Resolution 2.30

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.										.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																																																														.	.	.	.	.	.	.	.	.
Query SS confidence																																																														.	.	.	.	.	.	.	.	.
Query Sequence		T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	.	.	.	.	.	.	.	.	.	N	Q	E	C	F	R	L	I	R	Q	H
Query Conservation																																																														.	.	.	.	.	.	.	.	.
Alig confidence																																																														.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	N	S	D	R	K	I	T	D	D	L	V	K	N	V	E	K	L	G	V	K	A	L	F	V	T	V	D	A	P	S	L	G	Q	R	E	K	D	M	K	L	K	F	S	N	T	K	K	T	N	V	E	E	S	Q	G	A	S	R	A	L	S	K	F	I	D	P	S	L	T	W	K	D	I	E	E	L	K	K	K
Template Known Secondary structure				S	S															T		S							S		S	S													T	T							S	S				G	G	G	G		B	T	T	B		T	T
Template Predicted Secondary structure
Template SS confidence
		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.
		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.										.	.	.	.	.	.	300	.	.	.	.	.	.	.	.					.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.																.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.																.	.	.	.
Query Sequence		T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	.	.	.	.	.	.	.	.	.	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	.	.	.	.	V	R	T	G	S	H	G	P	S	D	L	S	P	V
Query Conservation																																								.	.	.	.	.	.	.	.	.																.	.	.	.
Alig confidence										.																.										.	.			.	.	.	.	.	.	.	.	.																.	.	.	.						.
Template Conservation										.																.										.	.																																				.
Template Sequence		T	K	L	P	I	V	I	K	.	G	V	Q	R	T	E	D	V	I	K	A	A	E	I	G	.	V	S	G	V	V	L	S	N	H	.	.	G	G	R	Q	L	D	F	S	R	A	P	I	E	V	L	A	E	T	M	P	I	L	E	Q	R	N	L	K	D	K	L	E	V	F	V	.	D	G	G	V	R	R	G	T
Template Known Secondary structure			S	S						.				S										T	T	.		S							T	.	.	T	T	T	S	S	T	T																	T	T	T		B	T	T	B					.		S	S			S
Template Predicted Secondary structure										.																.										.	.																																				.
Template SS confidence
		342	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.		.	.	.	.	.	370	.	.	.			.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.		.	410	.	.	.	.	.	.
		323	.	.	.	.	.	.	330	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	M	A	A	A	L	H	F	D	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	L	K	A	L	C	L	G	A
Template Known Secondary structure										T
Template Predicted Secondary structure
Template SS confidence
		417	.	.	420	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions