Job Description P38104 Confidence 33.59% Date Thu Jan 5 11:57:58 GMT 2012 Rank 433 Aligned Residues 196 % Identity 10% Template d1j93a_ SCOP info TIM beta/alpha-barrel UROD/MetE-like Uroporphyrinogen decarboxylase, UROD Resolution 2.30

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		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.																						.	.	.	130	.	.	.	.	.	.	.	.	.	140	.		.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Query Sequence		L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	.	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Alig confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation
Template Sequence		L	L	D	A	V	R	G	K	E	V	E	R	P	P	V	W	L	M	R	Q	A	G	R	Y	M	K	S	Y	Q	L	L	C	E	K	Y	P	L	F	R	D	R	S	E	N	V	D	L	V	V	E	I	S	L	Q	P	W	K	V	F	R	P	D	G	V	I	L	F	S	D	I	L	T	P	L	S	G	M	N	I	P
Template Known Secondary structure								T				S	S			B			S				T	T	T	T	T								S	S		S	T	T	T	T	T	T																			S								T	T	T					T	T
Template Predicted Secondary structure
Template SS confidence
		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		163	.	.	.	.	.	.	170	.	.	.	.	.							.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.											.	.	.
Predicted Secondary structure															.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	G	K	G	L	A	Y	E	P	A	T	K	G	.	.	.	.	.	.	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	.	.	.	.	.	.	.	.	.	.	R	F	G
Query Conservation															.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	D	I	I	K	G	K	G	P	V	I	F	D	P	L	R	T	A	A	D	V	E	K	V	R	E	F	I	P	E	K	S	V	P	Y	V	G	E	A	L	T	I	L	R	K	E	V	N	N	Q	A	A	V	L	G	F	V	G	A	P	F	T	L	A	S	Y	V	V	E	G	G	S	S	K	N	F	T	K	I	K
Template Known Secondary structure						T	T	T					S	S				S																															T	T	S	S																			S	B			S	S
Template Predicted Secondary structure
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		227	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.	.	.	.	.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.	.	.	.	.
Query Sequence		K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	.	.	.	.	.	.	.	.	.
Query Conservation																																																																									.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																.																		.	.	.	.	.	.	.	.	.
Template Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																.
Template Sequence		R	L	A	F	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	P	K	V	L	H	A	L	L	Q	K	F	.	.	.	.	.	.	.	.	A	T	S	M	A	K	Y	I	R	Y	Q	A	D	S	G	.	A	Q	A	V	Q	I	F	D	S	W	A	T	E	L	S	P	V	D	F	E	E	F	S	L	P	Y
Template Known Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.														T	T	.		S							G	G	G	G	G	S									T
Template Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.	.	.	.	.																.
Template SS confidence
		174	.	.	.														.	.	180	.	.	.	.	.	.	.	.	.	190									.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
			298	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure		.															.
Query SS confidence		.															.
Query Sequence		.	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	.	G	S	H	G	P	S	D	L	S	P	V
Query Conservation		.															.
Alig confidence		.															.
Template Conservation
Template Sequence		L	K	Q	I	V	D	S	V	K	L	T	H	P	N	L	P	L	I	L	Y	A	S	G	S	G	G	L
Template Known Secondary structure													S	T	T								S	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions