Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 19 Aligned Residues 357 % Identity 22% Template c3t8qA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:mandelate racemase/muconate lactonizing enzyme family PDBTitle: crystal structure of mandelate racemase/muconate lactonizing enzyme2 family protein from hoeflea phototrophica Resolution 2.00 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	C	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D	I	W	Q	F	F	Y	K	G	A	Y	W	R	R	G	P
Query Conservation
Alig confidence													.	.	.																									.
Template Conservation													.	.	.																									.
Template Sequence		M	K	I	A	D	I	E	T	F	A	N	.	.	.	E	F	V	C	F	V	K	V	T	T	D	S	G	E	T	G	W	G	Q	V	A	P	Y	Y	.	A	D	I	T	A	Q	V	L	H	R	Q	V	A	P	Y	A	L	G	K	P	A	L	D	I	D	Y	L	V	D	I	I	P	E	K	E	H	K	F	P	G	S
Template Known Secondary structure			B										.	.	.	S	S									T	T	S									S	S	S	.												T					T	T	S	B	T	T													T	T	T			S
Template Predicted Secondary structure													.	.	.																									.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.				.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																																															.	.	.
Query SS confidence																																															.	.	.
Query Sequence		V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	.	.	.	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T
Query Conservation																																															.	.	.
Alig confidence																																		.													.	.	.																												.	.	.	.	.
Template Conservation																																		.																																											.	.	.	.	.
Template Sequence		Y	L	R	R	A	L	G	G	L	D	T	A	L	W	D	L	R	G	R	L	E	G	K	P	V	C	E	L	I	G	G	T	.	P	G	T	V	R	A	Y	G	S	S	M	K	R	D	I	T	P	K	D	E	A	A	R	L	S	R	L	R	D	R	F	G	F	D	A	F	K	F	R	I	G	A	.	.	.	.	.
Template Known Secondary structure																							T		B					T	T			.	S												S	S	S																										S		.	.	.	.	.
Template Predicted Secondary structure																																		.																																											.	.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	C	G	R	G	Q	D	E	W	P	G	R	T	E	E	I	V	P	T	I	R	A	A	M	D	D	S	V	A	L	L	V	D	A	N	S	C	Y	G	P	E	Q	A	I	E	V	G	K	M	L	E	Q	N	G	I	S	H	Y
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T		T	T			S	S	T	T													S		T	T	S							T	T																	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																								151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	P	C	P	Y	W	E	Y	E	Q	T	Q	Q	V	T	N	A	L	S	I	D	V	T	G	G	E	Q	D	C	E	L	Q	N	W	R	R	M	I	E	M	K	A	V	D	I	V	Q	P	D	I	C	Y	L	G	G	I	T	R	T	L	R	V	A	E	M	A	H	K	A	G	L	P	C	T	P	H	A	A	N
Template Known Secondary structure					S		T	T													S	S						T	T													T	T			S										T	S														T	T			B						S
Template Predicted Secondary structure
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.
		318	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340							.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	.	.	.	.	.	.	E	Y	M	G	Y	S	E	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	P	G	L	G	I	E	F	D	E	K	L	A	A	K	Y	P	Y	E	P	A	Y	L
Query Conservation																									.	.	.	.	.	.
Alig confidence		.	.																						.	.	.	.	.	.
Template Conservation		.	.
Template Sequence		.	.	L	S	M	V	T	L	F	T	M	H	L	L	R	A	I	P	N	A	G	K	Y	L	E	F	S	I	E	G	E	D	Y	Y	P	W	Q	D	D	L	F	V	A	S	P	Y	E	I	V	D	G	K	A	T	V	T	D	L	P	G	W	G	V	E	V	S	P	T	W	L	E	T	S	A	H	Q	I	S	T	W
Template Known Secondary structure		.	.	T	T											T	T		T	T	B		S									T	T	T		G	G	G	T	T		B	S	S		S				B	T	T						S		S	B	T				B							T	S
Template Predicted Secondary structure		.	.
Template SS confidence
				289	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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