Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 25 Aligned Residues 353 % Identity 29% Template c3sjnB_ PDB info PDB header:lyase Chain: B: PDB Molecule:mandelate racemase/muconate lactonizing protein; PDBTitle: crystal structure of enolase spea_3858 (target efi-500646) from2 shewanella pealeana with magnesium bound Resolution 1.90 Å

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		1	.	.	.	.	.	.	.	.	10	.										.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.							.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	.	.	.	.	.	.	.	.	.	C	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	L	S	V	A	S	Y	.	.	.	.	.	.	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D
Query Conservation													.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		L	K	I	T	D	I	E	V	L	H	L	R	V	P	A	M	D	A	D	C	E	W	G	E	D	A	V	I	V	K	V	H	T	D	K	G	I	V	G	V	G	E	A	D	S	S	P	L	V	V	Q	A	C	I	E	A	P	Q	T	N	F	Y	C	N	G	L	K	R	L	L	I	G	E	N	A	L	E	I	E	R
Template Known Secondary structure			B											S	S		T	T	S				T	T	S										T	T	S								S	S														S	B	T	T	B								T	T	S	B	T	T
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		66	.	.	.	70	.	.	.	.	.	.		.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.		.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure													.																																															.
Query SS confidence													.																																															.
Query Sequence		I	W	Q	F	F	Y	K	G	A	Y	W	.	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	.	T	T	G	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F
Query Conservation													.																																															.
Alig confidence													.																																															.
Template Conservation
Template Sequence		L	W	N	K	M	Y	W	G	S	N	Y	M	G	R	R	G	A	G	I	H	A	I	S	A	I	D	I	A	L	W	D	I	A	G	Q	F	Y	G	V	P	V	H	T	L	L	G	G	K	Y	R	D	K	I	R	C	Y	G	T	F	I	P	A	D	K	P	E	D	N	V	A	I	V	Q	G	L	K	D	Q	G	F
Template Known Secondary structure										T	T	T	T		S	S	T																						T	S	B					T	T			S		S												S	S	G	G	G	G											T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.		.	.	220	.	.
Predicted Secondary structure																																																																												.
Query SS confidence																																																																												.
Query Sequence		K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	.	T	P	I	E	A
Query Conservation																																																																												.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	I	K	F	G	G	G	V	M	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	P	D	T	D	Y	A	I	V	K	A	V	R	E	A	A	G	P	E	M	E	V	Q	I	D	L	A	S	K	W	H	T	C	G	H	S
Template Known Secondary structure		S						S	T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T																		S	S	S							T	T	T	T		S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.																																	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	M	M	A	K	R	L	E	E	F	N	L	N	W	I	E	E	P	V	L	A	D	S	L	I	S	Y	E	K	L	S	R	Q	V	S	Q	K	I	A	G	G	E	S	L	T	T	R	Y	E	F	Q	E	F	I	T	K	S	N	A	D	I	V	Q	P	D	I	T	R	C	G	G	I	T	E	M	K	K	I	Y	D
Template Known Secondary structure								T	T	T	T	T		S					S	S		T	T										T	T		S	S						T	T																	S					B	T	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.
Predicted Secondary structure																																															.
Query SS confidence																																															.
Query Sequence		F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	Y	S	E	.	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	P	G	L	G	I	E	F	D	E	K	L	A
Query Conservation																																															.
Alig confidence																	.	.																													.
Template Conservation																	.	.
Template Sequence		I	A	Q	M	N	G	T	Q	L	I	P	H	G	F	S	.	.	T	G	I	L	L	H	A	S	V	H	F	L	A	A	C	E	Q	G	T	L	M	E	F	S	Q	S	S	S	P	L	F	T	S	L	V	K	N	Q	L	Q	F	D	N	G	F	V	A	V	S	D	A	P	G	L	G	I	E	L	D	E	E	L	I
Template Known Secondary structure						T	T						B			S	.	.														T	S	T	T																	S	B	T	T						T	T							S	S	B	T				B
Template Predicted Secondary structure																	.	.
Template SS confidence
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.			.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.
		382	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	Y	P	Y	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	K	Y	R	V	N
Template Known Secondary structure					B
Template Predicted Secondary structure
Template SS confidence
		368	.	370	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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