Return to main results Retrieve Phyre Job Id

Job DescriptionP38104
Confidence75.73%DateThu Jan 5 11:57:58 GMT 2012
Rank278Aligned Residues114
% Identity13%Templatec3qc3B_
PDB info PDB header:isomeraseChain: B: PDB Molecule:d-ribulose-5-phosphate-3-epimerase; PDBTitle: crystal structure of a d-ribulose-5-phosphate-3-epimerase (np_954699)2 from homo sapiens at 2.20 a resolution
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   132.......140.........150.........160.........170.........180.........190.........200.........210.
Predicted Secondary structure 










































Query SS confidence 















































































Query Sequence  LDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFDAVRNKFGFNEHLLH
Query Conservation            
    


 
                                        
   
  

   
    
 
Alig confidence 



















....................................













...






Template Conservation     
     



 
 

  ....................................              ... 
    
Template Sequence  EQWVKPXAVAGANQYTFHLE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ATENPGALIKDIRE. . . NGXKVGL
Template Known Secondary structure  T
SGG....................................G
S
...TT
Template Predicted Secondary structure 






....................................



...



Template SS confidence 















































































   77..80.........90...... ...100.........110 .......
 
   212.......220.........230........ .240.........250...... ...260.........270.........280.....
Predicted Secondary structure 







.....







.












Query SS confidence 


























. . . . .

















.




























Query Sequence  DMHHRLTPIEAARFGKSIEDYRMFWME. . . . . DPTPAENQECFRLIRQHT. VTPIAVGEVFNSIWDCKQLIEEQLIDYIR
Query Conservation 


  
    
      
    
  

.....

    
      
    . 



 

           
     
 
 
Alig confidence 


























.....

















.









.











.




Template Conservation       
  
         
 
       
  
          
           
   


.    
      
.

 

Template Sequence  AIKPGTSVEYLAPWANQIDXALVXTVEPGFGGQKFXEDXXPKVHWLRTQFPSLDIEVDGGV. GPDTVHKCAEAG. ANXIV
Template Known Secondary structure 
TTS
GGGGTTTGGGSSSS
TT
SS



GGG
TT
SS
.STTTT.

Template Predicted Secondary structure 
























.


.

Template SS confidence 















































































   118.120.........130.........140.........150.........160.........170........ .180.........190 .....
 
   286
Predicted Secondary structure 
Query SS confidence 
Query Sequence  T
Query Conservation   
Alig confidence 
Template Conservation 
Template Sequence  S
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   196
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions