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Job DescriptionP38104
Confidence81.05%DateThu Jan 5 11:57:58 GMT 2012
Rank264Aligned Residues150
% Identity10%Templatec3labA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:putative kdpg (2-keto-3-deoxy-6-phosphogluconate) PDBTitle: crystal structure of a putative kdpg (2-keto-3-deoxy-6-2 phosphogluconate) aldolase from oleispira antarctica
Resolution1.84 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   118.120.........130.........140.........150.........160.........170.........180.........190.......
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Query Sequence  MVYCHTTGHSIDEALDDYARHQELGFKAIRVQCGIPGMKTTYGMSKGKGLAYEPATKGQWPEEQLWSTEKYLDFMPKLFD
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Template Sequence  PLIPVIVIDDLVHAIPXAKALVAGGVHLLEVTL. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . RTEAGLAAIS
Template Known Secondary structure  S

S
GGGTT

T.....................................TSTT
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   13......20.........30.........40..... ....50.....
 
   198.200.........210.........220.........230.........240.........250..... ....260.........270....
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Query Sequence  AVRNKFGFNEHLLHDMHHRLTPIEAARFGKSIEDYRMFWMEDPTPAENQECFRLIRQH. . . TVTPIAVGEVFNSIWDCKQ
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Template Sequence  AIKKAVP. EAIVGAG. . TVCTADDF. . . . QKAIDAGAQFIVSPGLTPELIEKAKQVKLDGQWQGVFLPG. . VATASEVXI
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   56...60.. ....... 70....... ..80.........90.........100.........110....... ..120......
 
   275....280........ .290.........300.........310......
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Query Sequence  LIEEQLIDYIRTTL. THAGGITGMRRIADFASLYQVRTGSHGP
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Template Sequence  AAQAG. ITQLKCFPASAIGGAKLLKAWSGPFP. . DIQFCPTGG
Template Known Secondary structure  TT.

TTTTTTTTT
T..T
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   127..130. ........140.........150....... ..160......
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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