Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 65 Aligned Residues 335 % Identity 24% Template c3jw7E_ PDB info PDB header:isomerase Chain: E: PDB Molecule:dipeptide epimerase; PDBTitle: crystal structure of dipeptide epimerase from enterococcus faecalis2 v583 complexed with mg and dipeptide l-ile-l-tyr Resolution 1.80 Å

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		1	.	.	.	.	.	.	.	.	10	.															.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.					.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	C	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	.	.	.	.	G	R	E	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.	.	.	.
Template Conservation
Template Sequence		M	K	I	K	Q	V	H	V	R	A	S	K	I	K	L	K	E	T	F	T	I	A	L	G	T	I	E	S	A	D	S	A	I	V	E	I	E	T	E	E	G	L	V	G	Y	G	E	G	G	P	G	I	F	I	T	G	E	T	L	A	G	T	L	E	T	I	E	L	F	G	Q	A	I	I	G	L	N	P	F	N
Template Known Secondary structure																							T	T																T	T	S																																S	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	E	D	I	W	Q	F	F	Y	K	G	A	Y	W	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G
Query Conservation
Alig confidence																	.	.	.	.	.																															.
Template Conservation																	.	.	.	.	.																															.
Template Sequence		I	E	K	I	H	E	V	M	D	K	I	S	A	F	A	.	.	.	.	.	P	A	A	K	A	A	I	D	I	A	C	Y	D	L	M	G	Q	K	A	Q	L	P	L	Y	Q	L	L	G	G	Y	.	D	N	Q	V	I	T	D	I	T	L	G	I	D	E	P	N	V	M	A	Q	K	A	V	E	K	V	K	L	G
Template Known Secondary structure														S	S		.	.	.	.	.																				T	S	B					T	T		S	.		S										S															T	T	T
Template Predicted Secondary structure																	.	.	.	.	.																															.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.						.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.		.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	K	A	I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	D	T	L	K	I	K	V	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	E	A	D	I	A	R	V	K	A	I	R	E	A	V	G	F	D	I	K	L	R	L	D	A	N	Q	A	W	T	P	K	D	A
Template Known Secondary structure											S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																		T	T	S							T	T		S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		155	.	.	.	.	160	.	.	.	.																																				.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	R	F	G	K	S	I	E	D	Y	R	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	K	A	I	Q	A	L	A	D	Y	Q	I	E	L	V	E	Q	P	V	K	R	R	D	L	E	G	L	K	Y	V	T	S	Q	V	N	T	T	I	M	A	D	E	S	C	F	D	A	Q	D	A	L	E	L	V	K	K	G	T	V	D	V	I	N	I	K	L	M	K	C	G	G	I	H	E	A	L	K	I	N	Q
Template Known Secondary structure								T	G	G	G									S		T	T													S	S					S	T	T			S											T			S										T	S
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																			.
Query SS confidence																																																			.
Query Sequence		F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	Y	S	E	Q	M	L	E	.	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	P	G	L	G	I	E	F
Query Conservation																																																			.
Alig confidence																																																			.
Template Conservation
Template Sequence		I	C	E	T	A	G	I	E	C	M	I	G	C	M	A	E	E	T	T	I	G	I	T	A	A	A	H	L	A	A	A	Q	K	N	I	T	R	A	D	L	D	A	T	F	G	L	E	T	A	P	V	T	G	G	V	S	L	E	A	K	P	L	L	E	L	G	E	A	A	G	L	G	I	S	I
Template Known Secondary structure							T									T	T																	T	T								G	G	G	G	B	S	S		S	S	S	B	S	S		S				S						S	S	S	B	T		B
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions