Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 24 Aligned Residues 347 % Identity 20% Template c3i6eA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:muconate cycloisomerase i; PDBTitle: crystal structure of muconate lactonizing enzyme from2 ruegeria pomeroyi. Resolution 1.70 Å

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		1	.	.	.	.	.	.	.	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40					.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure														.																													.	.	.	.
Query SS confidence														.																													.	.	.	.
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	C	.	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	E	.	.	.	.	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D	I	W	Q	F	F	Y	K	G	A	Y
Query Conservation														.																													.	.	.	.
Alig confidence														.																													.	.	.	.																																			.
Template Conservation																																																																																	.
Template Sequence		Q	K	I	I	A	M	D	L	W	H	L	A	L	P	V	C	E	I	V	V	L	R	L	V	A	E	G	G	A	E	G	F	G	E	A	S	P	W	A	V	F	T	G	T	P	E	A	S	Y	A	A	L	D	R	Y	L	R	P	L	V	I	G	R	R	V	G	D	R	V	A	I	M	D	E	A	A	R	A	V	.
Template Known Secondary structure		S	B																								T	T	S											T	T	T	T													T	T					T	T		B	G	G	G												S	.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A	I	R	V	Q	C	G	I	P	G	M
Query Conservation
Alig confidence		.	.	.	.																																																																										.	.	.
Template Conservation		.	.	.	.																																																																										.	.	.
Template Sequence		.	.	.	.	A	H	C	T	E	A	K	A	A	L	D	S	A	L	L	D	L	A	G	R	I	S	N	L	P	V	W	A	L	L	G	G	K	C	R	D	T	I	P	L	S	C	S	I	A	N	P	D	F	D	A	D	I	A	L	M	E	R	L	R	A	D	G	V	G	L	I	K	L	K	T	G	F	.	.	.
Template Known Secondary structure		.	.	.	.	S	S																					T		B					T	T			S		S				B							S	S															T									S	S	.	.	.
Template Predicted Secondary structure		.	.	.	.																																																																										.	.	.
Template SS confidence
						101	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	H	D	M	H	H	R	L	T	P	I	E	A	A	R	F	G	K	S	I	E	D	Y	R	M	F
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	D	H	A	F	D	I	M	R	L	E	L	I	A	R	D	F	P	.	E	F	R	V	R	V	D	Y	N	Q	G	L	E	I	D	E	A	V	P	R	V	L	D	V	A	Q	F	Q	P	D
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S																	T	.	T	S							T	T				G	G	G										T	T			S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.
Template SS confidence
																																	174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.		.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D	F	A	S	L	Y	Q	V	R	T	G	S	H	G
Query Conservation
Alig confidence																																																																																.
Template Conservation																																																																																.
Template Sequence		F	I	E	Q	P	V	R	A	H	H	F	E	L	M	A	R	L	R	G	L	T	D	V	P	L	L	A	D	E	S	V	Y	G	P	E	D	M	V	R	A	A	H	E	G	I	C	D	G	V	S	I	K	I	M	K	S	G	G	L	T	R	A	Q	T	V	A	R	I	A	A	A	H	G	L	M	A	Y	G	.	G
Template Known Secondary structure							S		T	T										T	T		S	S					S	T	T			S											T			S										T	S														T	T						.
Template Predicted Secondary structure																																																																																.
Template SS confidence
		222	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.		300
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.			.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.
Predicted Secondary structure																															.	.
Query SS confidence																															.	.
Query Sequence		P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	.	.	Y	S	E	Q	M	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	P	G	L	G	I	E	F	D	E	K	L	A	A	K	Y	P	Y	E	P
Query Conservation																															.	.
Alig confidence																															.	.
Template Conservation
Template Sequence		D	M	F	E	A	G	L	A	H	L	A	G	T	H	M	I	A	A	T	P	E	I	T	L	G	C	E	F	Y	Q	A	S	Y	F	L	N	E	D	I	L	E	T	P	F	R	V	E	A	G	Q	V	I	V	P	D	G	P	G	L	G	A	R	A	D	P	E	K	L	E	H	Y	A	V	R	R
Template Known Secondary structure				S															T		T	T													T		S	S		S	B	S	S						T	T							S	S	B	T	S	S		B
Template Predicted Secondary structure
Template SS confidence
		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions