Job Description P38104 Confidence 100.00% Date Thu Jan 5 11:57:58 GMT 2012 Rank 34 Aligned Residues 362 % Identity 27% Template c3es8D_ PDB info PDB header:isomerase, lyase Chain: D: PDB Molecule:muconate cycloisomerase; PDBTitle: crystal structure of divergent enolase from oceanobacillus2 iheyensis complexed with mg and l-malate. Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.							.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure														.	.	.	.	.	.																												.	.	.
Query SS confidence														.	.	.	.	.	.																												.	.	.
Query Sequence		M	K	I	V	K	A	E	V	F	V	T	C	.	.	.	.	.	.	P	G	R	N	F	V	T	L	K	I	T	T	E	D	G	I	T	G	L	G	D	A	T	L	N	G	R	.	.	.	E	L	S	V	A	S	Y	L	Q	D	H	L	C	P	Q	L	I	G	R	D	A	H	R	I	E	D	I	W	Q	F	F	Y
Query Conservation														.	.	.	.	.	.																												.	.	.
Alig confidence														.	.	.	.	.	.																												.	.	.
Template Conservation
Template Sequence		M	K	I	T	D	L	E	L	H	A	V	G	I	P	R	H	T	G	F	V	N	K	H	V	I	V	K	I	H	T	D	E	G	L	T	G	I	G	E	M	S	D	F	S	H	L	P	L	Y	S	V	D	L	H	D	L	K	Q	G	L	L	S	I	L	L	G	Q	N	P	F	D	L	M	K	I	N	K	E	L	T
Template Known Secondary structure																B	T	T	S													T	T	S												S	S	S	S																	T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		72	.	.	.	.			.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure							.	.																																																			.	.	.	.
Query SS confidence							.	.																																																			.	.	.	.
Query Sequence		K	G	A	Y	W	.	.	R	R	G	P	V	T	M	S	A	I	S	A	V	D	M	A	L	W	D	I	K	A	K	A	A	N	M	P	L	Y	Q	L	L	G	G	A	S	R	E	G	V	M	V	Y	C	H	T	T	G	H	.	.	.	.	S	I	D	E	A	L	D	D	Y	A	R	H	Q	E	L	G	F	K	A
Query Conservation							.	.																																																			.	.	.	.
Alig confidence							.	.																																																			.	.	.	.
Template Conservation
Template Sequence		D	N	F	P	E	T	M	Y	Y	Y	E	K	G	S	F	I	R	N	G	I	D	N	A	L	H	D	L	C	A	K	Y	L	D	I	S	V	S	D	F	L	G	G	R	V	K	E	K	I	K	V	C	Y	P	I	F	R	H	R	F	S	E	E	V	E	S	N	L	D	V	V	R	Q	K	L	E	Q	G	F	D	V
Template Known Secondary structure				S				S		T	T																							T	S	B	G	G	G	G	T	T			S		S				B								S	S	G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210		.	.	.	.	.	.	.	.	.	220	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		I	R	V	Q	C	G	I	P	G	M	K	T	T	Y	G	M	S	K	G	K	G	L	A	Y	E	P	A	T	K	G	Q	W	P	E	E	Q	L	W	S	T	E	K	Y	L	D	F	M	P	K	L	F	D	A	V	R	N	K	F	G	F	N	E	H	L	L	.	H	D	M	H	H	R	L	T	P	I	E	A	A	R
Query Conservation																																																																			.
Alig confidence									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																								.
Template Conservation									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	L	Y	V	G	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	L	D	A	D	E	E	F	L	S	R	V	K	E	E	F	G	S	R	V	R	I	K	S	Y	D	F	S	H	L	L	N	W	K	D	A	H	R
Template Known Secondary structure							S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	G	G	G	S								T	T		S
Template Predicted Secondary structure									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		161	.	.	.	.	.	.																																				.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		225	.	.	.	.	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		F	G	K	S	I	E	D	Y	R	.	.	M	F	W	M	E	D	P	T	P	A	E	N	Q	E	C	F	R	L	I	R	Q	H	T	V	T	P	I	A	V	G	E	V	F	N	S	I	W	D	C	K	Q	L	I	E	E	Q	L	I	D	Y	I	R	T	T	L	T	H	A	G	G	I	T	G	M	R	R	I	A	D
Query Conservation											.	.
Alig confidence											.	.																												.	.
Template Conservation																																								.	.
Template Sequence		A	I	K	R	L	T	K	Y	D	L	G	L	E	M	I	E	S	P	A	P	R	N	D	F	D	G	L	Y	Q	L	R	L	K	T	D	Y	P	I	.	.	S	E	H	V	W	S	F	K	Q	Q	Q	E	M	I	K	K	D	A	I	D	I	F	N	I	S	P	V	F	I	G	G	L	T	S	A	K	K	A	A	Y
Template Known Secondary structure							T	T	S		S	S								S		T	T													S	S			.	.																	T			S										T	S
Template Predicted Secondary structure																																								.	.
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.			.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.
		303	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.		350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.			370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																	.																					.	.
Query SS confidence																																																	.																					.	.
Query Sequence		F	A	S	L	Y	Q	V	R	T	G	S	H	G	P	S	D	L	S	P	V	C	M	A	A	A	L	H	F	D	L	W	V	P	N	F	G	V	Q	E	Y	M	G	Y	S	E	Q	M	.	L	E	V	F	P	H	N	W	T	F	D	N	G	Y	M	H	P	G	D	K	.	.	P	G	L	G	I	E	F	D	E	K
Query Conservation																																																	.																					.	.
Alig confidence													.																																				.																					.	.
Template Conservation													.
Template Sequence		A	A	E	V	A	S	K	D	V	V	L	.	G	T	T	Q	E	L	S	V	G	T	A	A	M	A	H	L	G	C	S	L	T	N	I	N	H	T	S	D	P	T	G	P	E	L	Y	V	G	D	V	V	K	N	R	V	T	Y	K	D	G	Y	L	Y	A	P	D	R	S	V	K	G	L	G	I	E	L	D	E	S
Template Known Secondary structure						T	T						.			S															T	T		S		B		S		B								B	S			S	B	S	S				B		S	S							T	T	S	S	B	T	S			B
Template Predicted Secondary structure													.
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.		.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		380	.	.	.	.	.	.	.	.	.	390	.	.	.	.				.	.	.	.	.	400
Predicted Secondary structure																	.	.	.
Query SS confidence																	.	.	.
Query Sequence		L	A	A	K	Y	P	Y	E	P	A	Y	L	P	V	A	.	.	.	R	L	E	D	G	T
Query Conservation																	.	.	.
Alig confidence																	.	.	.
Template Conservation
Template Sequence		L	L	A	K	Y	Q	V	P	D	L	S	W	D	N	V	T	V	H	Q	L	Q	D	R	T
Template Known Secondary structure							B		S						S									T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions